Job Description P0A786 Confidence 96.78% Date Thu Jan 5 11:05:04 GMT 2012 Rank 82 Aligned Residues 133 % Identity 14% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150																		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	.	.	T	L	L	D	L	F	T	I	Q	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G
Query Conservation																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.															.
Template Conservation									.																																																						.	.	.															.
Template Sequence		D	Y	Q	L	T	N	V	.	R	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	.	.	.	G	S	I	G	Q	H	I	A	H	T	G	K	H	F	.	G
Template Known Secondary structure		S	S						.		S																			T	T										T	T										S	T	T									.	.	.	S													T	.	T
Template Predicted Secondary structure									.																																																						.	.	.															.
Template SS confidence
		89	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.		.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q	K	E	R	L	D	P	S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	L	G	V	S	R	S	G	R	E	R	.	.	.	.	.	.	.	.	.	A	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	T	H	.	.	.	.	.	.	.	.	.	.	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A
Template Known Secondary structure									S	S					.	.	.	.	.	.	.	.	.	T	T		S					G	G	G							T		S										S	S	S	T	.	.	.	.	.	.	.	.	.	.	T	S	B		T	T	T	T	T		S		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	H	P	L	P	R	V	D	E	I	A	T	D	V	D
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		I	L	F	N	V	G	.	R	G	N	A	I	N	E	G	D	L
Template Known Secondary structure							S	.		G	G	G	B
Template Predicted Secondary structure								.
Template SS confidence
		225	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions