Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 15 Aligned Residues 281 % Identity 26% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	N	P	Q	P	.	.	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	T	S	L	G
Query Conservation																																		.	.
Alig confidence																																		.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	R	H	L	L	T	I	S	A	L	C	P	K	E	L	A	Y	L	I	D	R	A	L	D	M	K	K	N	P	A	K	Y	T	A	R	A	A	N	K	T	L	L	A	F	F	A	K	P	S	L	R	T	R	V	S	L	E	T	A	M	T	R	L	G	G	H	A	I	Y	Y	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S			B	S	S	G	G	G	S																			G	G	G	G	T	T	T	T	T	T								S	S																	T							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	.	.	.	.	.	.	.	G	R	L	D	N	L
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence		.	.																																				.													.																	.	.	.	.	.	.	.
Template Conservation		.	.																																				.													.
Template Sequence		.	.	E	L	T	V	Q	D	T	A	E	V	F	S	R	M	V	D	I	C	T	A	R	L	A	T	K	E	M	M	R	E	M	A	Q	H	A	.	S	V	P	C	I	N	A	L	D	D	F	G	.	H	P	L	Q	M	V	C	D	F	M	T	I	K	E	K	F	T	A	A	G	E	F	S	N	G	F	K	G	I
Template Known Secondary structure		.	.												T	T	T		S							S	S												.	S	S					S	S		S	S		.																			T	T			T	T	T	G	G	G
Template Predicted Secondary structure		.	.																																				.													.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																.	.	.	.	.	.
Query SS confidence																																					.	.																.	.	.	.	.	.
Query Sequence		H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	.	.	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	.	.	.	.	.	.	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M
Query Conservation																																					.	.																.	.	.	.	.	.
Alig confidence												.														.											.	.																.	.	.	.	.	.
Template Conservation												.														.
Template Sequence		K	F	A	Y	C	G	D	S	M	N	.	N	V	T	Y	D	L	M	R	G	C	A	L	L	.	G	M	E	C	H	V	C	C	P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S	I	K	I	F	H	D	C	K	K	G	C	E	G	V	D	V	V	Y	T
Template Known Secondary structure							S			S	S	.														.	T									S	S	G	G	G	S																	T									S	S						T	T		S
Template Predicted Secondary structure												.														.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		T	R	V	Q	K	E	R	L	D	P	S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P	.	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N
Query Conservation																																											.	.
Alig confidence									.	.	.	.	.																														.	.
Template Conservation									.	.	.	.	.
Template Sequence		D	S	W	M	K	E	A	.	.	.	.	.	R	L	K	V	L	T	P	F	Q	V	D	D	A	V	M	A	V	T	S	K	R	S	I	F	M	N	C	L	P	A	T	R	G	E	E	Q	T	A	S	V	I	D	G	P	K	S	V	C	Y	D	E	A	G	N	R	L	H	S	A	M	A	V	L	D	F	F	L	H
Template Known Secondary structure								T	.	.	.	.	.						G	G	G		B						T	T	S		T	T							S				T	T	T	T	B						T	S	T	T	B																						S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions