Return to main results Retrieve Phyre Job Id

Job DescriptionP0A786
Confidence88.81%DateThu Jan 5 11:05:04 GMT 2012
Rank208Aligned Residues93
% Identity14%Templatec3ggpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........210. ........220.........230....
Predicted Secondary structure 






















.








Query SS confidence 























































.






















Query Sequence  LHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWS. LHSSIEEVMAEVDILYMTRVQKE
Query Conservation 
 

 


     
  
         
  
    
                
  
 .      

   




      
Alig confidence 







...













.






...



















.



















...
Template Conservation    
 


 ...
 

  

  
   .
    
 ...  
                              



  
 ...
Template Sequence  QNVLIVGV. . . GFMGGSFAKSLRRS. GFKGKIY. . . GYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP. . .
Template Known Secondary structure 
S
...ST.T

S...
S
TTS
SS
TGGGGGG

S
S
...
Template Predicted Secondary structure 


...

.


...



















...
Template SS confidence 















































































   31....... .40.........50.. ....... 60.........70.........80.........90.........100
 
   235....240.........250.........260.......
Predicted Secondary structure 















Query SS confidence 
































Query Sequence  RLDPSEYANVKAQFVLRASDLHNAKANMKVLHP
Query Conservation                 
    
  
   
  


Alig confidence  ...







......















Template Conservation  ...      
 ......           

   
Template Sequence  . . . VRTFREIA. . . . . . KKLSYILSEDATVTDQ
Template Known Secondary structure  ...GGG......S
TT

Template Predicted Secondary structure  .........





Template SS confidence 
































   101....... .110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions