Job Description P0A786 Confidence 88.36% Date Thu Jan 5 11:05:04 GMT 2012 Rank 216 Aligned Residues 110 % Identity 16% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		G	E	T	L	A	D	T	I	S	V	I	S	T	Y	.	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L
Query Conservation																.
Alig confidence																.										.	.	.										.							.							.	.	.	.	.	.	.													.										.
Template Conservation																										.	.	.										.							.							.	.	.	.	.	.	.													.										.
Template Sequence		E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	.	.	.	N	G	A	Y	L	K	S	R	L	.	S	V	P	V	I	L	.	I	K	P	S	G	Y	.	.	.	.	.	.	.	D	V	L	Q	F	L	A	K	A	G	K	L	.	T	S	S	I	G	V	V	T	Y	.
Template Known Secondary structure													T	T				S								.	.	.							T	T		.	S	S					.							.	.	.	.	.	.	.									T	T		T	.	T	S								.
Template Predicted Secondary structure																										.	.	.										.							.							.	.	.	.	.	.	.													.										.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.		80	.	.	.	.	.		.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L
Query Conservation
Alig confidence		.	.															.
Template Conservation		.	.															.
Template Sequence		.	.	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	.	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V
Template Known Secondary structure		.	.	S	S													.	T									S	S														T	T
Template Predicted Secondary structure		.	.															.
Template SS confidence
				113	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions