Job Description P0A786 Confidence 41.07% Date Thu Jan 5 11:05:04 GMT 2012 Rank 411 Aligned Residues 128 % Identity 16% Template c1u9yD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii Resolution 2.65 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.							.								.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.							.								.	.	.	.	.	.
Template Sequence		S	I	R	A	L	A	K	I	Y	S	N	I	V	D	K	L	I	T	I	N	P	H	E	T	.	.	.	H	I	K	D	F	F	.	T	I	P	F	I	Y	G	.	.	.	.	.	.	D	A	V	P	K	L	A	E	Y	V	K	D	K	L	N	D	P	I	V	L	A	P	D	K	G	A	L	E	F	A	K	T	A
Template Known Secondary structure															S						S		S		G	.	.	.	G	G	G	G	G		.	S	S						.	.	.	.	.	.											T	T	T		S	S						S	S	G	G	G
Template Predicted Secondary structure																										.	.	.							.								.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.		.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
																	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	.	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		S	K	I	L	N	A	E	Y	D	Y	L	E	I	A	P	K	T	L	D	A	K	D	R	D	V	F	I	V	D	D	I	I	S	T	G	G	T	M	A	T	A	V	K	L	L	K	E	Q	G	A	K	K	I	I	A	A	C	V	H	P	V	L	I	G	D	A	L	N	K	L	Y	S	A	G	V	E	E	V	V	G
Template Known Secondary structure						T						B				B	S	S				T	T											S	S	S													T	T															T	T									T		S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	S	I	E	E	V	M	A	E	V	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	T	Y	L	S	E	V	S	K	V	S	V
Template Known Secondary structure			T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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