Job Description P0A786 Confidence 42.46% Date Thu Jan 5 11:05:04 GMT 2012 Rank 405 Aligned Residues 158 % Identity 11% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130
Predicted Secondary structure																																							.																			.	.	.	.	.	.	.													.
Query SS confidence																																							.																			.	.	.	.	.	.	.													.
Query Sequence		F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	.	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	.	.	.	.	.	.	.	L	A	T	E	F	S	G	N	V	P	V	L	.	N	A	G	D
Query Conservation																																							.																			.	.	.	.	.	.	.													.
Alig confidence																							.	.	.	.	.	.											.																			.	.	.	.	.	.	.													.
Template Conservation																							.	.	.	.	.	.
Template Sequence		Q	N	K	L	A	A	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	.	.	.	.	.	.	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	K	G	C	N	I	T	S	P	F	K	E	R	A	Y	Q	L	A	D	E	Y	S	Q	R	A	K	L	A	E	A	C	N	T	L	K	K	L	D	D
Template Known Secondary structure									T	T												T	.	.	.	.	.	.	T	T											T	T								T	T							T	T		S										T			S						S	S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		131	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	S	.	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A
Query Conservation				.
Alig confidence				.																																.	.	.															.									.																		.
Template Conservation																																				.	.	.															.									.																		.
Template Sequence		G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	.	.	.	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	.	Q	Q	N	I	V	L	A	N	.	R	T	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	.	N
Template Known Secondary structure		S																			T	T				T	T								S	.	.	.	S	T	T	T	T	T	T							T	.	T								.	S	S												G	G	G	S	.
Template Predicted Secondary structure																																				.	.	.															.									.																		.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A
Template Known Secondary structure							G	G	G				S		B	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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