Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 9 Aligned Residues 299 % Identity 28% Template c1ortD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		A	N	P	L	Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	.	.	.	.	N	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.																																										.
Template Conservation																																																																															.
Template Sequence		A	F	N	M	H	N	R	N	L	L	S	L	M	H	H	S	T	R	E	L	R	Y	L	L	D	L	S	R	D	L	K	R	A	K	Y	T	G	T	E	Q	Q	H	L	K	R	K	N	I	A	L	I	F	E	K	T	S	T	R	T	R	C	A	F	E	V	A	A	Y	D	Q	G	A	N	V	T	Y	I	.	D	P
Template Known Secondary structure						T	T			B	S			S																								T					S		T	T								S	S																T	T							.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	.	L	D	N	L
Query Conservation																																																																													.
Alig confidence								.																																					.							.																									.
Template Conservation								.																																					.							.
Template Sequence		N	S	S	Q	I	G	.	H	K	E	S	M	K	D	T	A	R	V	L	G	R	M	Y	D	A	I	G	Y	R	G	F	K	Q	E	I	V	E	E	L	A	K	F	A	.	G	V	P	V	F	N	.	G	L	T	D	E	Y	H	P	T	Q	M	L	A	D	V	L	T	M	R	E	H	S	D	K	P	L	H	D	I
Template Known Secondary structure		T	T					.			T														S							S												S	.	S	S					.				S	S																			S		G	G	G
Template Predicted Secondary structure								.																																					.							.
Template SS confidence
		80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	.	.	.	.	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q
Query Conservation																																														.	.	.	.
Alig confidence											.															.																				.	.	.	.
Template Conservation											.															.
Template Sequence		S	Y	A	Y	L	G	D	A	R	.	N	N	M	G	N	S	L	L	L	I	G	A	K	L	.	G	M	D	V	R	I	A	A	P	K	A	L	W	P	H	D	E	F	V	A	Q	C	K	K	F	A	E	E	S	G	A	K	L	T	L	T	E	D	P	K	E	A	V	K	G	V	D	F	V	H	T	D	V	W	V
Template Known Secondary structure							S		S		.	S	T													.	T									G	G	G	S																T	T							S						T	T	T		S								S
Template Predicted Secondary structure											.															.
Template SS confidence
		157	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		233	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.																						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	R	L	D	P	.	.	.	S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	.	H	N	A	K	A	N	M	K	V	L	H	P	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F
Query Conservation								.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	G	E	P	V	E	A	W	G	E	R	I	K	E	L	L	P	Y	Q	V	N	M	E	I	M	K	A	T	G	N	P	R	A	K	F	M	H	C	L	P	A	F	H	N	S	E	T	K	V	G	K	Q	I	A	E	Q	Y	P	N	L	A	N	G	I	E	V	T	E	D	V	F	E	S	P	Y	N	I	A	F
Template Known Secondary structure			T	T	S		S	S										G	G	G		B								S	S		T	T							S					S	S	S	S	S										T	T	S	S	S		S	S	B						T	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	A	E	N	R	M	H	T	I	K	A	I	L	V	S	T	L	A
Template Known Secondary structure																			T	S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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