Job Description P0A786 Confidence 35.97% Date Thu Jan 5 11:05:04 GMT 2012 Rank 428 Aligned Residues 156 % Identity 14% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.		.	.	.	.	.	130
Predicted Secondary structure																																							.																					.	.	.	.	.	.	.									.
Query SS confidence																																							.																					.	.	.	.	.	.	.									.
Query Sequence		F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	.	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	.	.	.	.	.	.	.	T	E	F	S	G	N	V	P	.	V	L	N	A	G	D
Query Conservation																																							.																					.	.	.	.	.	.	.									.
Alig confidence																							.	.	.	.	.	.											.																					.	.	.	.	.	.	.									.
Template Conservation																							.	.	.	.	.	.
Template Sequence		H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	.	.	.	.	.	.	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L	A	G	A	V	N	T	L	M	R	L	E	D
Template Known Secondary structure										T												T	.	.	.	.	.	.	T												T	T								T	T										S										T	S		S						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		131		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A
Query Conservation			.
Alig confidence			.																																	.	.	.															.									.																		.
Template Conservation																																				.	.	.															.									.																		.
Template Sequence		G	R	L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	.	.	.	G	G	A	S	R	G	V	L	L	P	L	L	S	L	.	D	C	A	V	T	I	T	N	.	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	.	S
Template Known Secondary structure		S																				T				T	T									.	.	.	S													T	.	T								.	S	S											T	T	T	T	S	.
Template Predicted Secondary structure																																				.	.	.															.									.																		.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I
Template Known Secondary structure							T	G	G	G	T	T				S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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