Job Description P0A786 Confidence 63.05% Date Thu Jan 5 11:05:04 GMT 2012 Rank 348 Aligned Residues 183 % Identity 16% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		34	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.										.	.																																												.
Query SS confidence													.										.	.																																												.
Query Sequence		N	P	Q	P	E	L	L	K	H	K	V	.	I	A	S	C	F	F	E	A	S	.	.	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	.	S	T	Y	V	D	A	I	V	M	R	H	P	Q
Query Conservation													.										.	.																																												.
Alig confidence													.										.	.																												.	.	.	.	.	.											.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		G	P	L	G	S	M	I	N	A	K	T	K	V	I	G	L	I	G	H	P	V	E	H	S	F	S	P	I	M	H	N	A	A	F	K	D	K	G	L	N	Y	V	Y	V	A	F	D	V	L	P	.	.	.	.	.	.	E	N	L	K	Y	V	I	D	G	A	K	A	L	G	I	V	G	F	N	V	T	I	P	H
Template Known Secondary structure				S	S					T	T									S	S		T	T		S												T	T												G	.	.	.	.	.	.	G	G	G	G	G									T								T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		110	.	.								.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure					.	.	.	.	.	.	.													.
Query SS confidence					.	.	.	.	.	.	.													.
Query Sequence		E	G	A	.	.	.	.	.	.	.	A	R	L	A	T	E	F	S	G	N	V	P	.	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D
Query Conservation					.	.	.	.	.	.	.													.
Alig confidence					.	.	.	.	.	.	.													.																																								.	.	.															.
Template Conservation																																																																.	.	.															.
Template Sequence		K	I	E	I	M	K	Y	L	D	E	I	D	K	D	A	Q	L	I	G	A	V	N	T	I	K	I	E	D	G	K	A	I	G	Y	N	T	D	G	I	G	A	R	M	A	L	E	E	E	I	G	R	V	K	D	K	N	I	V	I	Y	G	A	.	.	.	G	G	A	A	R	A	V	A	F	E	L	A	K	D	.
Template Known Secondary structure		T	T	G	G	G	G	G		S										T									T	T																									S									.	.	.	S											T	S	S	.
Template Predicted Secondary structure																																																																.	.	.															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150
		182	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		G	N	R	F	Y	F	I	A	P	.	.	.	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y
Query Conservation											.	.	.
Alig confidence			.								.	.	.
Template Conservation			.
Template Sequence		N	.	N	I	I	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	G	V	D	I	I	I
Template Known Secondary structure		S	.							S	S																T												T	T				T	T
Template Predicted Secondary structure			.
Template SS confidence
		151		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions