Job Description P0A786 Confidence 79.92% Date Thu Jan 5 11:05:04 GMT 2012
Rank 278 Aligned Residues 105
% Identity 10% Template c1mldA_
PDB info
PDB header: oxidoreductase(nad(a)-choh(d))Chain: A: PDB Molecule: malate dehydrogenase;
PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases
Resolution 1.83 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
157 . . 160 . .
. . . . . . . 170 . . . . . . . . . 180 . . .
. . . . . .
190 . . . . . . . . . 200 . . . . . . . . . 210 . .
. . . . . . . 220 . . . . . . . . . 230 .
Predicted Secondary structure  
. . . . .
Query SS confidence  
.
.
.
.
.
Query Sequence  
H V A M V G .
D L K Y G R T V H S L T Q A L A K F D G N .
.
R F Y F I A .
P D A L A M P Q Y I L D M L D E K G I A W S L .
H S S I E E V M A E V D I L Y M T R V
Query Conservation  
    .                                   . .           .                                         .                        
Alig confidence  
. . . . . . . . .
Template Conservation  
    . . .                   .                                                                    
Template Sequence  
K V A V L G A S .
.
.
G G I G Q P L S L L L K N S .
P L V S R L T L Y D I A H T P G V A A D L S H I E T R A T V K G Y L G P E Q L P D C L K G C D V V V I P A G
Template Known Secondary structure  
T T T . . . S T T T . T T S S S S T T S S S S S G G G T T S S
Template Predicted Secondary structure  
. . . .
Template SS confidence  
   
2 . . . . . . .
10 . . . . . . . . . 20 . . .
. . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . .
 
   
232 . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . .
260 . . . . .
Predicted Secondary structure  
. . .
Query SS confidence  
.
.
.
Query Sequence  
Q K E R L D P S E Y A N V K A Q F V L R A S D L H N A K .
.
.
A N M K V L
Query Conservation  
                                                . . .        
Alig confidence  
. . .
Template Conservation  
                                                 
Template Sequence  
V P R K P G M T R D D L F N T N A T I V A T L T A A C A Q H C P D A M I C
Template Known Secondary structure  
T T G G G G T T S
Template Predicted Secondary structure  
Template SS confidence  
   
78 . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]