Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 2 Aligned Residues 301 % Identity 52% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		P	L	Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	.	.	.	.	N	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.
Template Conservation
Template Sequence		D	W	K	G	R	D	V	I	S	I	R	D	F	S	K	E	D	I	E	T	V	L	A	T	A	E	R	L	E	R	E	L	K	E	K	G	Q	L	E	Y	A	K	G	K	I	L	A	T	L	F	F	E	P	S	T	R	T	R	L	S	F	E	S	A	M	H	R	L	G	G	A	V	I	G	F	A	E	A	S	T
Template Known Secondary structure				T	T			B			G	G	G																								S	S			T	T	T	T								S	S			S													T	T							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A
Query Conservation
Alig confidence						.																																					.
Template Conservation						.																																					.
Template Sequence		S	S	V	K	.	K	G	E	S	L	R	D	T	I	K	T	V	E	Q	Y	C	D	V	I	V	I	R	H	P	K	E	G	A	A	R	L	A	A	E	V	A	.	E	V	P	V	I	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	Y	T	I	K	K	E	F	G	R	I	D	G	L	K	I	G
Template Known Secondary structure		S	G	G	G	.	G	T											T	T	T		S							S	S	T	T								T		.	S	S								T	T	S																	S	S		S	S	S
Template Predicted Secondary structure						.																																					.
Template SS confidence
		82	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q	K	E	R	L	.	D	P
Query Conservation																																																																															.
Alig confidence																							.																																																								.
Template Conservation																							.
Template Sequence		L	L	G	D	L	K	Y	G	R	T	V	H	S	L	A	E	A	L	T	F	Y	.	D	V	E	L	Y	L	I	S	P	E	L	L	R	M	P	R	H	I	V	E	E	L	R	E	K	G	M	K	V	V	E	T	T	T	L	E	D	V	I	G	K	L	D	V	L	Y	V	T	R	I	Q	K	E	R	F	P	D	E
Template Known Secondary structure				S		T	T	T											G	G	G	S	.										G	G	G													T	T							S		T					T	T		S									G	G	G	S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	Y	L	K	V	K	G	S	Y	Q	V	N	L	K	V	L	E	K	A	K	D	E	L	R	I	M	H	P	L	P	R	V	D	E	I	H	P	E	V	D	N	T	K	H	A	I	Y	F	R	Q	V	F	N	G	V	P	V	R	M	A	L	L	A	L	V	L	G	V
Template Known Secondary structure						T	T	T	T				B		T	T	G	G	G	G	S		T	T							S			S	S	S	B		G	G	G	G	G	S	T	T	B								T														T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions