Job Description P0A786 Confidence 42.13% Date Thu Jan 5 11:05:04 GMT 2012 Rank 407 Aligned Residues 108 % Identity 12% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																.	.																						.
Query SS confidence																																.	.																						.
Query Sequence		D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	.	.	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	.	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R
Query Conservation																																.	.																						.
Alig confidence												.	.	.															.			.	.																						.
Template Conservation												.	.	.															.
Template Sequence		G	G	A	R	V	V	V	I	G	A	.	.	.	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	.	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	Y	D	D	C	R	D	A	D	L	V	V	I	C	A
Template Known Secondary structure			S	S								.	.	.	S												T	T	.	T			S							S	S															G	G	G	T	T								G	G	G		S	S		S
Template Predicted Secondary structure												.	.	.															.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	E	R	L	D	P	S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		G	A	N	D	L	V	D	K	N	I	A	I	F	.	.	.	.	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T	N	P
Template Known Secondary structure															.	.	.	.										T	T			S							S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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