Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 21 Aligned Residues 286 % Identity 21% Template c1js1Z_ PDB info PDB header:transferase Chain: Z: PDB Molecule:transcarbamylase; PDBTitle: crystal structure of a new transcarbamylase from the2 anaerobic bacterium bacteroides fragilis at 2.0 a3 resolution Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																													.	.																																															.	.	.	.	.
Query SS confidence																													.	.																																															.	.	.	.	.
Query Sequence		K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	N	.	.	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	T	.	.	.	.	.
Query Conservation																													.	.																																															.	.	.	.	.
Alig confidence												.	.																.	.																																															.	.	.	.	.
Template Conservation												.	.
Template Sequence		K	K	F	T	C	V	Q	D	I	G	.	.	D	L	K	S	A	L	A	E	S	F	E	I	K	K	D	R	F	K	Y	V	E	L	G	R	N	K	T	L	L	M	I	F	F	N	S	S	L	R	T	R	L	S	T	Q	K	A	A	L	N	L	G	M	N	V	I	V	L	D	I	N	Q	G	A	W	K	L	E	T
Template Known Secondary structure				B	S	S	G	G	G	G		.	.															S	T	T	T	T	T	T	T	T	T	T								S	S			S													T	T										T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	.	.	.	.	.	.	.	.	.	.	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T
Query Conservation		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.										.							.
Template Conservation																																																									.							.
Template Sequence		E	R	G	V	I	M	D	G	D	K	P	E	H	L	L	E	A	I	P	V	M	G	C	Y	C	D	I	I	G	V	R	S	F	A	R	F	E	N	R	E	Y	D	Y	N	E	V	I	I	N	Q	F	I	Q	H	S	.	G	R	P	V	F	S	.	M	E	A	A	T	R	H	P	L	Q	S	F	A	D	L	I	T
Template Known Secondary structure		S	S	S					S	S														T	T		S										S	S							T	T										S	.	S	S					.	S	S		S	S
Template Predicted Secondary structure																																																									.							.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure												.											.	.
Query SS confidence												.											.	.
Query Sequence		I	Q	E	T	Q	G	R	L	D	N	.	L	H	V	A	M	V	G	D	L	K	.	.	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E
Query Conservation												.											.	.
Alig confidence												.											.	.																.																				.	.	.	.	.	.	.
Template Conservation																																								.																				.	.	.	.	.	.	.
Template Sequence		I	E	E	Y	K	K	T	A	R	P	K	V	V	M	T	W	A	P	H	P	R	P	L	P	Q	A	V	P	N	S	F	A	E	W	M	N	A	T	.	D	Y	E	F	V	I	T	H	P	E	G	Y	E	L	D	P	K	F	V	.	.	.	.	.	.	.	G	N	A	R	V	E	Y	D	Q	M	K	A	F	E	G
Template Known Secondary structure							S	S	S	S											S	S				S												T	S	.	S	S								T	T									.	.	.	.	.	.	.	T	T					S							T	T
Template Predicted Secondary structure																																								.																				.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																															.	.
Query SS confidence																			.																															.	.
Query Sequence		V	D	I	L	Y	M	T	R	V	Q	K	E	R	L	D	P	S	.	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P	.	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A
Query Conservation																			.																															.	.
Alig confidence																			.																		.													.	.
Template Conservation																																					.
Template Sequence		A	D	F	I	Y	A	K	N	W	A	A	Y	T	G	D	N	Y	G	Q	I	L	S	T	D	R	N	W	T	V	G	D	R	Q	M	A	.	V	T	N	N	A	Y	F	M	H	C	L	P	V	R	R	N	M	I	V	T	D	D	V	I	E	S	P	Q	S	I	V	I	P	E	A	A	N	R	E	I	S	A	T	V
Template Known Secondary structure			S											S	G	G	G	T	T							T	T	S	S	B						T	.	T	S	S	S							S				B	T	T	T	B						T	S	T	T	B
Template Predicted Secondary structure																																					.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	L	V	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K	R	L	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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