Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 10 Aligned Residues 298 % Identity 24% Template c1fvoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine transcarbamylase; PDBTitle: crystal structure of human ornithine transcarbamylase complexed with2 carbamoyl phosphate Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		A	N	P	L	Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	.	.	.	.	.	A	N	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.																																											.
Template Conservation																																																																																.
Template Sequence		K	V	Q	L	K	G	R	D	L	L	T	L	K	N	F	T	G	E	E	I	K	Y	M	L	W	L	S	A	D	L	K	F	R	I	K	Q	K	G	E	Y	L	P	L	L	Q	G	K	S	L	G	M	I	F	E	K	R	S	T	R	T	R	L	S	T	E	T	G	F	A	L	L	G	G	H	P	C	F	L	.	T
Template Known Secondary structure						T	T			B	S		G	G	G	S																					T	S						T	T	T	T								S	S			S													T	T							.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L
Query Conservation
Alig confidence									.																																					.											.
Template Conservation									.																																					.											.
Template Sequence		T	Q	D	I	H	L	G	.	V	N	E	S	L	T	D	T	A	R	V	L	S	S	M	A	D	A	V	L	A	R	V	Y	K	Q	S	D	L	D	T	L	A	K	E	A	.	S	I	P	I	I	N	G	L	S	D	.	L	Y	H	P	I	Q	I	L	A	D	Y	L	T	L	Q	E	H	Y	S	S	L	K	G	L
Template Known Secondary structure		S	T	T	S		T	T	.	T	S			S												S							S													.	S	S					S			S	.	S																		S			T	T
Template Predicted Secondary structure									.																																					.											.
Template SS confidence
		113	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	.	.	.	.	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q
Query Conservation																																																	.	.	.	.
Alig confidence									.	.																.																							.	.	.	.
Template Conservation									.	.																.
Template Sequence		T	L	S	W	I	G	D	.	.	G	N	N	I	L	H	S	I	M	M	S	A	A	K	F	.	G	M	H	L	Q	A	A	T	P	K	G	Y	E	P	D	A	S	V	T	K	L	A	E	Q	Y	A	K	E	N	G	T	K	L	L	L	T	N	D	P	L	E	A	A	H	G	G	N	V	L	I	T	D	T	W	I
Template Known Secondary structure							S		.	.	S									T	T	G	G	G	G	.	T									T	T																		T	T							S							T	T		S								S
Template Predicted Secondary structure									.	.																.
Template SS confidence
		190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		233	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure					.	.																																			.
Query SS confidence					.	.																																			.
Query Sequence		K	E	R	.	.	L	D	P	S	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N
Query Conservation					.	.																																			.
Alig confidence					.	.																																			.
Template Conservation
Template Sequence		S	M	G	R	E	E	E	K	K	K	R	L	Q	A	F	Q	G	Y	Q	V	T	M	K	T	A	K	V	A	A	S	D	W	T	F	L	H	C	L	P	R	K	P	E	E	V	D	D	E	V	F	Y	S	P	R	S	L	V	F	P	E	A	E	N	R	K	W	T	I	M	A	V	M	V	S	L	L	T
Template Known Secondary structure					S	S	S	T	T							T	T	T		S	B							T	S		T	T							S	S			T	T	T	B						S	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions