Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 11 Aligned Residues 297 % Identity 29% Template c1a1sA_ PDB info PDB header:transcarbamylase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		P	L	Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	.	.	.	.	N	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																																												.	.
Template Conservation																																																																															.	.
Template Sequence		S	L	A	G	R	D	L	L	C	L	Q	D	Y	T	A	E	E	I	W	T	I	L	E	T	A	K	M	F	K	I	W	Q	K	I	G	K	P	H	R	L	L	E	G	K	T	L	A	M	I	F	Q	K	P	S	T	R	T	R	V	S	F	E	V	A	M	A	H	L	G	G	H	A	L	Y	L	N	A	.	.	Q
Template Known Secondary structure				T	T			B	S		G	G	G	S																						T					T	T	T	T								S	S																T	T								T	.	.	T
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A
Query Conservation
Alig confidence																																											.							.
Template Conservation																																											.							.
Template Sequence		D	L	Q	L	R	R	G	E	T	I	A	D	T	A	R	V	L	S	R	Y	V	D	A	I	M	A	R	V	Y	D	H	K	D	V	E	D	L	A	K	Y	A	.	T	V	P	V	I	N	.	G	L	S	D	F	S	H	P	C	Q	A	L	A	D	Y	M	T	I	W	E	K	K	G	T	I	K	G	V	K	V	V
Template Known Secondary structure		T			S	S	S	S	S														S							S	S												.	S	S					.				S	S																		S		S	T	T
Template Predicted Secondary structure																																											.							.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	E	K	.	.	.	.	G	I	A	W	S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q	K	E	R
Query Conservation																																																	.	.	.	.
Alig confidence						.	.																.																										.	.	.	.
Template Conservation						.	.																.
Template Sequence		Y	V	G	D	.	.	G	N	N	V	A	H	S	L	M	I	A	G	T	K	L	.	G	A	D	V	V	V	A	T	P	E	G	Y	E	P	D	E	K	V	I	K	W	A	E	Q	N	A	A	E	S	G	G	S	F	E	L	L	H	D	P	V	K	A	V	K	D	A	D	V	I	Y	T	D	V	W	A	S	M	G
Template Known Secondary structure				S		.	.																.	T									T	T																		T	T		B					S						T	T	T		S								S	S	T	T
Template Predicted Secondary structure						.	.																.
Template SS confidence
		159	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		236	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																															.	.
Query SS confidence						.	.																															.	.
Query Sequence		L	D	P	S	.	.	E	Y	A	N	V	K	A	Q	F	V	L	R	A	S	D	L	H	N	A	K	A	N	M	K	V	L	H	P	L	P	.	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N	R
Query Conservation						.	.																															.	.
Alig confidence						.	.																															.	.
Template Conservation
Template Sequence		Q	E	A	E	A	E	E	R	R	K	I	F	R	P	F	Q	V	N	K	D	L	V	K	H	A	K	P	D	Y	M	F	M	H	C	L	P	A	H	R	G	E	E	V	T	D	D	V	I	D	S	P	N	S	V	V	W	D	Q	A	E	N	R	L	H	A	Q	K	A	V	L	A	L	V	M	G	G
Template Known Secondary structure				S	T	T		T						G	G	G		B						T	T	S		T	T							S				B	T	T	T	B						T	S	T	T	B																							S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions