Phyre 2 alignment of P0A8I8 with c3luaA

Job Description P0A8I8
Confidence 11.18% Date Thu Jan 5 11:07:57 GMT 2012

Rank 95 Aligned Residues 89

% Identity 9% Template c3luaA_

PDB info PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence	M	K	L	Q	L	V	A	V	G	T	K	M	P	D	W	V	Q	T	G	F	T	E	Y	L	R	R	F	P	K	D	M	P	F	E	L	I	E	I	P	A	G	K	R	G	K	N	A	D	I	K	R	I	L	D	K	E	G	E	Q	M	L	A	A	A	G	K	N	R	I	V	T	L	D	I	P	G	K	.	P	W
Query Conservation																																																																														.
Alig confidence									.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation									.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	D	G	T	V	L	L	I	.	.	D	Y	F	E	Y	E	R	E	K	T	K	I	I	F	D	N	I	G	E	Y	D	.	.	.	F	I	E	V	E	N	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	Y	S	I	F	K	D	L	D	S	I	T	L	I	I	X	D	I	A	F	P	V	E	K
Template Known Secondary structure									.	.		S																				.	.	.						S			.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T	T					S						S		S	S	S
Template Predicted Secondary structure									.	.																						.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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