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Job DescriptionP19642
Confidence46.98%DateThu Jan 5 11:37:27 GMT 2012
Rank5Aligned Residues96
% Identity16%Templatec3mp7A_
PDB info PDB header:protein transportChain: A: PDB Molecule:preprotein translocase subunit secy; PDBTitle: lateral opening of a translocon upon entry of protein suggests the2 mechanism of insertion into membranes
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  PLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAI
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Template Sequence  PIILTFALYANIQLWARVLDRLGHPWLGRFDPT. TGSPISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLW
Template Known Secondary structure  TTS

SSB



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   288.290.........300.........310.........320 .........330.........340.........350.........360......
 
   420........ .430......
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Query Sequence  . . . . . . . TRFNLKTPG. RDSEVASS
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Template Sequence  VELTGLDARSIARIPGFRRDPRTLE
Template Known Secondary structure  SSTTGGG




TTTTTTSTT
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   367..370.........380.........390.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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