 |
Job Description | P19642 | Confidence | 6.59% | Date | Thu Jan 5 11:37:27 GMT 2012 |
Rank | 72 | Aligned Residues | 40 |
% Identity | 35% | Template | c1tinA_ |
PDB info |
PDB header:serine protease inhibitor | Chain: A: PDB Molecule:trypsin inhibitor v; |
PDBTitle: three-dimensional structure in solution of cucurbita maxima2 trypsin inhibitor-v determined by nmr spectroscopy
|
Resolution | UNK |
|
  |   |
442 | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | A | P | G | K | S | G | Y | N | V | P | A | I | L | E | A | L | G | G | A | D | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | V | S | L | D | N | C | I | T | R | L | R | L | S | V | K | D | M | S | L | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   | . | . | . | . |   |
|   |
|   |
|   |
|   |
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|
Template Sequence |   |
P | H | L | V | G | V | G | G | S | V | A | K | A | I | I | E | . |
. |
. |
. |
R | Q | N | P | N | V | K | A | V | I | L | E | E | G | T | P | V | T | K | D | F | R | C | N | R | V | R | I | W | V | N | K | R | G | L | V |
Template Known Secondary structure |   |
S | S |
| T | T | S |
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
| T | T | S |  |  |  |  |  |  | S |
| S |
|
| S | S |
|
|
| T | T |  |  |  |  |  |  |  | T | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|