Job Description P37676 Confidence 31.86% Date Thu Jan 5 11:56:50 GMT 2012 Rank 128 Aligned Residues 208 % Identity 11% Template d2f34a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		27	.	.	30	.	.		.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure								.					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence								.					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		S	L	R	F	G	Y	.	E	T	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	Q	H	I	A	A	K	K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	.	.	.	.	.	.	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M
Query Conservation								.					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence								.					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	I	V	T	T	I	L	E	E	P	Y	V	M	Y	R	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	L	D	L	L	K	E	L	S	N	I	L	G	F	L	Y	D	V	K	L	V	P	D	G	K	Y	G	A	Q	N	D	K	G	E	W	N	G	M	V	K	E	L	I	D	H	R	A	D	L
Template Known Secondary structure										B	T	T	T	B				S			S				G	G	G	G			S														T									T	T						B		T	T	S		B									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F	L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	R	A	P	V	K	T	P	A	D	L	K	G	L
Query Conservation
Alig confidence																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	P	L	T	I	T	Y	V	R	E	K	V	I	D	.	F	S	K	P	F	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I
Template Known Secondary structure				S	S		B							T	T			.			S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S						T		S	S	S
Template Predicted Secondary structure																		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.																																		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	R	T	N	N	S	P	M	N	I	A	A	F	K	V	F	G	A	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	M	P	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation																																																																																.
Template Sequence		E	Y	G	A	V	R	D	G	S	T	M	T	F	F	K	K	S	K	I	S	T	Y	E	K	M	W	A	F	M	S	S	R	Q	Q	S	A	L	V	K	N	S	D	E	G	I	Q	R	V	L	T	T	D	Y	A	L	L	M	E	S	T	S	I	E	Y	V	T	Q	R	N	C	N	L	T	Q	I	G	G	L	.	I
Template Known Secondary structure						B	T	T	S																								T					S	B	S	S											S	S																		T	T					S	S		.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D	G	L	S	P	E	F	Q	Q	A	L	V	S	S	A	Q	E	.	A	G	N	Y	Q	R	K	L	V
Query Conservation																																	.
Alig confidence														.	.																		.
Template Conservation														.	.
Template Sequence		D	S	K	G	Y	G	V	G	T	P	I	G	.	.	S	P	Y	R	D	K	I	T	I	A	I	L	Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W
Template Known Secondary structure		S										T	T	.	.		T	T														T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions