Job Description P37676 Confidence 94.13% Date Thu Jan 5 11:56:50 GMT 2012 Rank 55 Aligned Residues 148 % Identity 17% Template d1z7me1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.90

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F	L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	.	W
Query Conservation																																																																																.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	K	P	N	D	V	I	T	F	L	E	H	G	I	V	D	I	G	F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	T	L	D	E	N	D	F	D	D	Y	Y	E	L	L	Y	L	K	I	G	Q	C
Template Known Secondary structure														T	T	S		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S											T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																																				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																										.	.																						.	.	.
Query SS confidence																																										.	.																						.	.	.
Query Sequence		R	D	V	T	N	S	R	A	P	V	K	T	P	A	D	L	K	G	L	K	I	R	T	N	N	S	P	M	N	I	A	A	F	K	V	F	G	A	N	P	.	.	I	P	M	P	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	.	.	.	H	P	I	N	V	V	W	S	A	K	F	F	E	V
Query Conservation																																										.	.																						.	.	.
Alig confidence																																										.	.							.															.	.	.
Template Conservation																																																		.
Template Sequence		I	F	A	L	A	S	Y	P	D	F	S	N	K	N	F	Q	R	H	K	R	I	A	S	K	Y	P	R	V	T	K	K	Y	F	A	Q	K	Q	E	D	I	E	I	I	K	L	E	G	S	.	V	E	L	G	P	V	V	G	L	A	D	A	I	V	D	I	V	E	T	G	N	T	L	S	A	N	G	L	E	V	I
Template Known Secondary structure									G	G	G	G	G				S	S							S												T	T									S	S		.	T	T					T	T	S		S							S	S	S					T	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D	G	L	S	P	E	F	Q	Q	A	L	V	S
Query Conservation
Alig confidence				.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		E	K	.	.	.	.	.	.	I	S	D	I	S	T	R	M	I	V	N	K	S	S	F	K	F	K	K	D	K	I	I	E	M	V	E	R
Template Known Secondary structure				.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		172	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions