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Job DescriptionP37676
Confidence99.09%DateThu Jan 5 11:56:50 GMT 2012
Rank18Aligned Residues216
% Identity16%Templatec3un6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
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Query Sequence  AQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLL
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Template Sequence  QQVIKIG. YLPITHSANLXXTKKLLSQYNHPKYKLELVKFNN. . . . . WPDLXDALNSGRIDGASTL. . . . . . . . . . . . . .
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SSGGGTSSS
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   34.....40 .........50.........60.........70.... .....80.........90...
 
   105....110.........120.........130.........140.........150... ......160.. .......170.... ...
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Query Sequence  DVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNS. RAPVKTPAD. LKGLKIRTNNSP. . . . . MNI
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Template Sequence  . . . . . . . . . . . . . . . . . . . IELAXKSKQKGSNIKAVALGHHEGNVIXGQKGXHLNEFNNNGDDYHFGIPHRYSTHYLLLE
Template Known Secondary structure  ...................TT


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   94.....100.........110.........120.........130.........140.........150....
 
   178.180....... ..190.........200.........210.........220.........230 .........240.........
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Query Sequence  AAFKVFGANP. . . . . IPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTH. . . HAYSPLLVVINKAKFDGLS
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Template Sequence  ELRKQLKIKPGHFSYHEXSPAEXPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHK
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TTS

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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   250.........260.........270.........280
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Query Sequence  PEFQQALVSSAQEAGNYQRKLVAEDQQKIID
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Template Sequence  DVAQAFV. QDYKKSGFKXNDRKQSVDIXTHH
Template Known Secondary structure  .TTS
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   235....240. ........250.........260....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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