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Job DescriptionP37676
Confidence33.20%DateThu Jan 5 11:56:50 GMT 2012
Rank123Aligned Residues120
% Identity14%Templatec3py7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:maltose-binding periplasmic protein,paxillin ld1,protein e6 PDBTitle: crystal structure of full-length bovine papillomavirus oncoprotein e62 in complex with ld1 motif of paxillin at 2.3a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTI. DMEMSGSNNFAGLSPVMNLLDVPFLF
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Template Sequence  VIWINGDKGYNGLAEVGKKFEKDTG. . IKVTVEHPDKLE. . EKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAA
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TTS
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TT..TT
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SGGGTT
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Query Sequence  RDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNS. . . . RAPVKTPADL
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Template Sequence  A. . . . . . . . FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEI
Template Known Secondary structure  ........TTB
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   85 ....90.........100.........110.........120.........130...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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