Job Description P37676 Confidence 39.44% Date Thu Jan 5 11:56:50 GMT 2012 Rank 117 Aligned Residues 187 % Identity 13% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	S	Q	H	I	A	A	K	K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F	L	F	R	D	T	A	H	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	G	P	H	T	A	L	K	D	I	A	N	K	Y	S	E	K	T	G	V	K	V	N	V	N	F	G	P	Q	A	T	.	.	.	.	.	.	W	F	E	K	A	K	K	D	A	D	I	L	F	G	A	S	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T																								S		G	G	G	.	.	.	.	.	.	T									S					S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.																		.
Query SS confidence																																																								.	.	.	.	.	.	.	.																		.
Query Sequence		H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	R	A	P	V	K	T	P	A	D	L	K	G	L	K	I	R	T	.	.	.	.	.	.	.	.	N	N	S	P	M	N	I	A	A	F	K	V	F	G	A	N	P	.
Query Conservation																																																								.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.																																																				.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V	S	K	I	K	P	L	Y	F	R	E	A	I	I	L	T	Q	K	G	N	P	L	K	I	K	G	L	K	D	L	A	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M	I	G	R	T	Q	D
Template Known Secondary structure		.	.	.								T	T	G	G	G	S		G	G	G														S	T	T		T	T				S							S										T	T	S	S			T	T	T	T							G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
															188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	M	P	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D	G	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.																							.	.	.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		I	K	T	I	Q	N	F	R	N	N	I	V	A	F	V	P	N	S	G	S	A	R	K	L	F	A	Q	D	Q	A	D	A	W	I	T	W	I	D	W	S	K	S	N	P	D	I	G	T	A	.	.	V	A	I	E	K	D	L	V	V	Y	R	T	F	N	V	I	A	K	E	G	A	S	K	E	T	Q	D	F	I
Template Known Secondary structure											T						S	S										T	T			S													T	T	S				.	.					T	T	T												T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
					248	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	S	P	E	F	Q	Q	A	L	V	S
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	Y	L	S	S	K	E	A	K	E	I	F	K	K
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions