Job Description P37676 Confidence 36.78% Date Thu Jan 5 11:56:50 GMT 2012 Rank 121 Aligned Residues 84 % Identity 13% Template c2xx7B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 2; PDBTitle: crystal structure of 1-(4-(1-pyrrolidinylcarbonyl)phenyl)-3-2 (trifluoromethyl)-4,5,6,7-tetrahydro-1h-indazole in complex with3 the ligand binding domain of the rat glua2 receptor and glutamate4 at 2.2a resolution. Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.		.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.
Predicted Secondary structure											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		A	A	Q	S	L	R	F	G	Y	.	E	T	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	Q	H	I	A	A	K	K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	.	.	.	.	.	.	.	Q	A	M	I	S	G	V	R	G
Query Conservation											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																												.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		A	N	K	T	V	V	V	T	T	I	L	E	S	P	Y	V	M	M	K	K	N	H	E	M	L	E	G	N	E	R	Y	E	G	Y	C	V	.	D	L	A	A	E	I	A	K	H	C	G	F	K	Y	K	L	T	I	V	G	D	G	K	Y	G	A	R	D	A	D	T	K	I	W	N	G	M	V	G	E	L	V	Y
Template Known Secondary structure													B	T	T	T	B				T	T		T	T			S	G	G	G			S				.											T									T	T						B		T	T	T			B									T
Template Predicted Secondary structure																																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	A	D	I	A	I	A	P	L	T	I	T	L	V	R	E	E	V	I	D	F	S	K	P	F	M
Template Known Secondary structure		T	S		S				S	S		B							T	T					S		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions