Job Description P37676 Confidence 99.18% Date Thu Jan 5 11:56:50 GMT 2012 Rank 13 Aligned Residues 225 % Identity 10% Template c2x7pA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme; PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold Resolution 2.34 Å

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		27	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure														.									.	.
Query SS confidence														.									.	.
Query Sequence		S	L	R	F	G	Y	E	T	S	Q	T	D	.	S	Q	H	I	A	A	K	K	.	.	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L
Query Conservation														.									.	.
Alig confidence														.									.	.					.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	K	V	A	Y	I	P	E	H	F	S	T	P	L	F	F	A	Q	Q	Q	G	Y	Y	K	A	H	.	.	.	.	.	D	L	S	I	E	F	V	K	V	P	E	G	.	.	.	.	S	G	R	L	I	N	L	L	N	S	N	E	V	D	I	A	I	G	L	T	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B							S	G	G	G									T	T					T	.	.	.	.	.	T			B						T	T		.	.	.	.										T	T	S		S								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.													.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.																		.	.								.
Query SS confidence																																																				.	.	.																		.	.								.
Query Sequence		L	D	V	P	F	L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	.	.	.	R	A	P	V	K	T	P	A	D	L	K	G	L	K	I	R	T	.	.	N	N	S	P	M	N	I	.
Query Conservation																																																				.	.	.																		.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																		.	.								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	I	A	D	I	A	K	G	N	E	N	I	H	V	L	D	T	Y	V	K	S	P	L	L	W	A	V	S	T	G	S	N	R	D	D	V	T	D	A	K	Q	L	K	R	I	G	V	S	R	I	G	S	G	S	Y	V	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		T	T										S										T	T		T	T			S	S	T	T							S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
				178	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.											.	.	.	.	.																							.	.	.	.
Query SS confidence		.	.											.	.	.	.	.																							.	.	.	.
Query Sequence		.	.	A	A	F	K	V	F	G	A	N	P	.	.	.	.	.	I	P	M	P	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	.	.	.	.	P	I	N	V	V	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D
Query Conservation		.	.											.	.	.	.	.																							.	.	.	.
Alig confidence		.	.											.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		S	F	V	L	A	H	Q	L	G	V	P	S	F	D	Q	F	Q	V	L	S	N	F	K	N	L	R	D	S	V	N	L	K	D	G	V	E	G	S	D	A	F	X	W	E	Y	F	T	S	K	K	Y	Y	D	N	H	E	I	K	Q	I	D	Q	I	Y	T	P	W	S	S	W	V	V	A	T	S	S	D	S	L	Q
Template Known Secondary structure										T	S										S	S									T	T		T	T	S				S															T	T	S										S	S		S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	P	E	F	Q	Q	A	L	V	S	S	A	Q	E	A	G	N	Y	Q	R	K	L	V	A	E	D	Q	Q	K	I	I	D	G	M	K	E	A	G	V	E	V	I	T	D	L	D	R	K	A	F	S	D
Query Conservation
Alig confidence												.																											.	.	.	.	.	.
Template Conservation												.																											.	.	.	.	.	.
Template Sequence		A	K	S	D	V	I	K	N	F	I	.	D	A	V	N	Q	G	I	Q	Y	Y	N	E	H	V	D	E	A	I	E	Y	I	S	S	N	L	D	.	.	.	.	.	.	Y	S	A	E	D	A	K	E	W	T	K
Template Known Secondary structure			S									.												T													S	S	.	.	.	.	.	.											T
Template Predicted Secondary structure												.																											.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions