Job Description P37676 Confidence 76.58% Date Thu Jan 5 11:56:50 GMT 2012 Rank 81 Aligned Residues 125 % Identity 15% Template c2v25B_ PDB info PDB header:receptor Chain: B: PDB Molecule:major cell-binding factor; PDBTitle: structure of the campylobacter jejuni antigen peb1a, an2 aspartate and glutamate receptor with bound aspartate Resolution 1.49 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.									.
Query SS confidence																																											.	.	.	.	.	.									.
Query Sequence		W	E	N	G	W	R	D	V	T	N	S	R	A	P	V	K	T	P	A	D	L	K	G	L	K	I	R	T	N	N	S	P	M	N	I	A	A	F	K	V	F	.	.	.	.	.	.	G	A	N	P	I	P	M	P	.	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	W
Query Conservation																																											.	.	.	.	.	.									.
Alig confidence																																											.	.	.	.	.	.									.
Template Conservation
Template Sequence		Y	Q	D	A	I	G	L	L	V	L	K	E	K	K	Y	K	S	L	A	D	M	K	G	A	N	I	G	V	A	Q	A	A	T	T	K	K	A	I	G	E	A	A	K	K	I	G	I	D	V	K	F	S	E	F	P	D	Y	P	S	I	K	A	A	L	D	A	K	R	V	D	A	F	S	V	D	K	S	I	L	L
Template Known Secondary structure												G	G	G				S	G	G	G	G	T	T							T	T		S													T									S	S										T	T	S	S	S										T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D	G	L	S	P	E	F	Q	Q	A	L	V	S	S	A	Q	E	A	G	N	Y	Q	R	K	L	V	A	E	D
Query Conservation
Alig confidence									.	.																				.	.	.	.	.
Template Conservation									.	.																				.	.	.	.	.
Template Sequence		G	Y	V	D	D	K	S	.	.	E	I	L	P	D	S	F	E	P	Q	S	Y	G	I	V	T	K	K	D	.	.	.	.	.	D	P	A	F	A	K	Y	V	D	D	F	V	K	E	H	K	N	E	I	D	A	L	A	K	K	W
Template Known Secondary structure		T	T			T	T		.	.				S				S										T	T	.	.	.	.	.															T											T
Template Predicted Secondary structure									.	.																				.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions