Job Description P37676 Confidence 42.17% Date Thu Jan 5 11:56:50 GMT 2012 Rank 112 Aligned Residues 169 % Identity 13% Template c2qmwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:prephenate dehydratase; PDBTitle: the crystal structure of the prephenate dehydratase (pdt) from2 staphylococcus aureus subsp. aureus mu50 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	G	Y	E	T	S	Q	T	D	S	Q	H	I	A	A	K	K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F
Query Conservation
Alig confidence																							.	.	.	.	.	.												.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.												.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	Y	Y	L	G	P	K	G	T	F	S	Y	L	A	C	R	Q	Y	F	S	.	.	.	.	.	.	E	N	E	A	T	F	Q	P	K	S	N	.	.	.	.	.	L	F	E	V	I	K	A	V	A	D	D	D	T	S	I	G	V	V	P	I	E	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	T	T	S												.	.	.	.	.	.	T	T	S	S						S	S	.	.	.	.	.												S	S									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.												.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G	D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	R	A	P	V	K	T	P	A	D	L	K	G	L	K	I	R	T	N	N	S	P	M	N	.	.	I	A	A	F	K	V	F	G	A	N
Query Conservation																																																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.																						.												.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.												.																						.												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	I	E	G	T	I	N	I	V	A	D	A	.	L	A	Q	Q	D	V	F	A	H	G	E	I	R	L	D	I	N	F	A	L	Y	.	G	N	G	T	D	S	I	S	D	I	K	.	.	K	V	Y	S	I	A	P	A	I	S	Q	T	T	N	Y	I	H	Q	H	Q	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S	S	S		S							.			T	T	S	S																.			S	S			S	T	T			.	.												S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.																						.												.	.
Template SS confidence
													57	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		187	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		P	I	P	M	P	.	F	A	E	V	Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V
Query Conservation							.
Alig confidence							.												.	.
Template Conservation																			.	.
Template Sequence		Y	D	Y	V	D	S	T	I	Q	S	L	T	K	I	E	N	G	.	.	V	A	A	I	A	P	L	G	S	G	E	A	Y	G	F	T	P	I	D	T	H	I	E	D	Y	P	H	N	V	T	R	F	L	V	I
Template Known Secondary structure						S	S							T		B	T	T	.	.							T	T	T	S	G	G	G	T										S		S
Template Predicted Secondary structure																			.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions