Job Description P37676 Confidence 40.78% Date Thu Jan 5 11:56:50 GMT 2012 Rank 115 Aligned Residues 175 % Identity 13% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	N	D	L	L	Q	E	R	T	K	G	E	L	K	L	K	L	F	P	D	S	T	L	G	N	A	Q	A	M	I	S	G	V	R	G	G	T	I	D	M	E	M	S	G	S	N	N	F	A	G	L	S	P	V	M	N	L	L	D	V	P	F	L	F	R	D	T	A	H	A	H	K	T	L	D	G	K	V	G
Query Conservation
Alig confidence																							.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	A	R	E	I	F	K	R	L	G	V	A	D	V	V	A	S	I	S	E	.	.	.	.	.	Y	G	A	M	I	P	G	L	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T											.	.	.	.	.	G	G	G							T	T	S		S				S			B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.																															.	.	.	.
Query SS confidence																																					.	.	.	.	.	.																															.	.	.	.
Query Sequence		D	D	L	K	A	S	L	E	G	K	G	L	K	V	L	A	Y	W	E	N	G	W	R	D	V	T	N	S	R	A	P	V	K	T	P	.	.	.	.	.	.	A	D	L	K	G	L	K	I	R	T	N	N	S	P	M	N	I	A	A	F	K	V	F	G	A	N	P	I	P	M	.	.	.	.	P	F	A	E	V
Query Conservation																																					.	.	.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.																															.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	C	A	A	V	A	Y	S	Q	P	I	L	C	D	A	E	A	F	A	L	K	K	G	N	P	L	G	L	K	S	Y	K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	A	L	E	A	G	V	P	R	D	R	V	I	V	V	P	D	G	Q	S	G
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	S				S													T	T		T	T				B						T		T	T							T	T	S										T			G	G	G					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		Y	T	G	L	E	T	R	T	I	D	A	Q	E	H	P	I	N	V	V	.	.	.	.	W	S	A	K	F	F	E	V	Q	K	F	L	S	L	T	H	H	A	Y	S	P	L	L	V	V	I	N	K	A	K	F	D	G	L	S	P	E	F	Q	Q	A	L	V	S	S	A	Q	E	A	G	N	Y
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																														.	.	.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		L	K	M	L	Q	D	G	R	I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E	G	A	P	V	Y	C	D	G	A	A	F	R	K	G	.	.	.	.	.	D	E	A	L	R	D	A	F	D	V	E	L	A	K	L	K	E	S
Template Known Secondary structure								T	S		S																	T		T	T						S		B	T						B						G	G	.	.	.	.	.	G
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions