Job Description P39382 Confidence 99.13% Date Thu Jan 5 12:00:14 GMT 2012 Rank 80 Aligned Residues 219 % Identity 10% Template d2bbkh_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution 1.75

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.		.
Predicted Secondary structure																																		.	.																									.	.	.	.	.	.															.
Query SS confidence																																		.	.																									.	.	.	.	.	.															.
Query Sequence		Y	H	A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	.	.	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	.	.	.	.	.	.	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	.	F
Query Conservation																																		.	.																									.	.	.	.	.	.															.
Alig confidence																																		.	.																									.	.	.	.	.	.															.
Template Conservation
Template Sequence		A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	P	W	M	T	S	L	T	P	D	G	K	T	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	K	A	F	K	R	M	L	D	V	P	D	C	Y	H	I	F	P	T	A	P	D	T	F	F	M	H	C	R	D	G	S	L	A
Template Known Secondary structure							T	T							S			G	G	G					T	T	S	S								S	S	S								T	T	T	T										S									T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D
Query Conservation
Alig confidence																																	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		K	V	A	F	G	T	E	G	T	P	E	I	T	H	T	E	V	F	H	P	E	D	E	F	L	I	N	H	P	A	Y	.	.	.	.	S	Q	K	A	G	R	L	V	W	P	T	Y	T	G	K	I	H	Q	I	D	L	S	S	G	D	A	K	F	L	P	A	V	E	A	L	T	E	A	E	R	A	D	G	W	R
Template Known Secondary structure							S	S	S											S		T	T	S		B		S					.	.	.	.		T	T	T	T						B	T	T	S								T	T	S	S									S	S							T	T
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.										.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.									.
Query SS confidence																																		.	.	.	.	.	.	.	.	.									.
Query Sequence		E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	.	.	.	.	.	.	A	L	Q	E	V	T	L	V	.	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A
Query Conservation																																		.	.	.	.	.	.	.	.	.									.
Alig confidence			.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.									.												.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	G	G	W	Q	Q	V	A	Y	H	R	A	L	D	R	I	Y	L	L	V	D	Q	R	D	E	W	R	H	K	T	A	S	R	F	V	V	V	L	D	A	K	T	G	E	R	L	A	K	F	E	M	G	H	.	.	.	.	.	.	.	.	.	.	E	I	D	S	I	N	V	S	Q
Template Known Secondary structure			.	.	.	.	.	.	.	.		S	S	S						T	T	T	T											T	T		T	T	S										T	T	T												.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.											.	320	.	.	.	.	.	.	.
		265	.	.			.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure					.	.						.
Query SS confidence					.	.						.
Query Sequence		S	G	N	.	.	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation					.	.						.
Alig confidence					.	.						.
Template Conservation
Template Sequence		D	E	K	P	L	L	Y	A	L	S	T	G	D	K	T	L	Y	I	H	D	A	E	S
Template Known Secondary structure		S	S	S								T	T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions