Job Description P39382 Confidence 98.29% Date Thu Jan 5 12:00:14 GMT 2012 Rank 124 Aligned Residues 236 % Identity 15% Template d1sq9a_ SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat Resolution 1.90

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	.	.	.	.	.	.	.	.	.	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		F	I	A	T	A	N	A	G	K	A	H	D	A	D	I	F	S	V	S	A	C	N	.	.	S	F	T	V	S	C	S	G	D	G	Y	L	K	V	W	D	N	K	L	L	D	N	E	N	P	K	D	K	S	Y	S	H	F	V	H	K	S	G	L	H	H	V	D	V	L	Q	A	I	E	R	D	A	F	E	L	C
Template Known Secondary structure									S	S		S	S	S									S	.	.	S							T	T	S							S	B			T	T			G	G	G	G								T	T													T	T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.	.																																			.												.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																			.												.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	.	N	C	G	F	E	G	L	A	Y	S	R	.	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																																			.												.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																			.												.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	T	T	S	F	S	G	D	L	L	F	Y	R	I	T	R	E	D	E	T	K	K	V	I	F	E	K	L	D	L	L	D	S	D	M	K	K	H	S	F	W	A	L	K	W	G	A	S	N	S	H	R	L	V	A	T	D	V	K	G	T	T	Y	I	W	K	F	H	P	F	A	D	E	S	N	S	L	T
Template Known Secondary structure								T	T	S											T	T	T											S		T	T	G	G	G	S																				T	T	S									S	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																																												182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																																																																															.
Template Sequence		L	N	W	S	P	T	L	E	L	Q	G	T	V	E	S	P	M	T	P	S	Q	F	A	T	S	V	D	I	S	E	R	G	L	I	A	T	G	F	N	N	G	T	V	Q	I	S	E	L	S	T	L	R	P	L	Y	N	F	E	S	Q	H	N	N	S	N	S	I	R	S	V	K	F	S	P	Q	G	S	.	L	L
Template Known Secondary structure		T															S	S	S	S											T	T	S							T	T	S							T	T	T	T																							S	S	T	T	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		A	I	A	H	D	S	N	S	F	G	C	I	T	L	Y	E	T	E	F	G	E	R	I	G	S	L	S	V	P	G	E	F	A	H	S	S	W	V	M	S	L	S	F	N	D	S	G	E	T	L	C	S	A	G	W	D	G	K	L	R	F	W	D	V	K	T
Template Known Secondary structure								T	T									T	T	T									B				B	S	B	S	S									S	S	S	S							T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions