Return to main results Retrieve Phyre Job Id

Job DescriptionP39382
Confidence99.56%DateThu Jan 5 12:00:14 GMT 2012
Rank45Aligned Residues226
% Identity15%Templated1crua_
SCOP info6-bladed beta-propeller Soluble quinoprotein glucose dehydrogenase Soluble quinoprotein glucose dehydrogenase
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.........90....... ..100.........110. ......
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Query Sequence  DGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPL. . . . . . . DFVKDLETIEYIGD. . . . NQFVIS
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Template Conservation       
  
  
  


 




 
 
   
 
       
                   
  


  
     
 

  
Template Sequence  DKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS
Template Known Secondary structure 



SS
TTS
TTT

TTT


TT



TTSS
S
TTTTTS
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   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   118. 120.........130.........140.........150.........160.........170..
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Query Sequence  DE. . . . . . . . . . RDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEK. . . . . . . . . . . . . . .
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Template Sequence  GTFKNPKSKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQ
Template Known Secondary structure 
TT


S
TTTT


SS


TTS


TTTTSGGGTTS


TT
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   173......180.........190.........200.........210.........220....
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Query Sequence  . . . . . . . . . . . . . . . . . NPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHE. . . . . . . . . . .
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Template Sequence  HTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPN. GKLLQSEQGPNSDDEINLIV
Template Known Secondary structure 



TT

TT
SS
TTS


TT

TT
SB

S
TT.S

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   180.........190.........200.........210.........220.........230........ .240.........250........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTC
Template Known Secondary structure  TT
B

TTT
SSSSS
SS


GGGSS
TT




STTSS

TT


GGG


SSB


S



TT

S

GGG
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   225....230.........240.........250. ........260........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SRALQEVTLVGEVIGEMSLTKGSRGLS. . . . . . . HNIKQAEGVAMDASGNI
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Template Conservation              
 
               
 
       
 
    
   
               

  
   


 
Template Sequence  GEMTYICWPTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNV
Template Known Secondary structure  TT
GGGGSS


B






TT

TT
TTBSSS


TTSSSS

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TTSS
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   339340.........350.........360.........370.........380.........390.........400.........410........
 
   269270.....
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Query Sequence  YIVSEPN
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Template Conservation 
      
Template Sequence  LYVLTDT
Template Known Secondary structure 
S
Template Predicted Secondary structure 

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   419420.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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