Job Description P39382 Confidence 99.17% Date Thu Jan 5 12:00:14 GMT 2012 Rank 78 Aligned Residues 217 % Identity 11% Template c3q6kA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:43.2 kda salivary protein; PDBTitle: salivary protein from lutzomyia longipalpis Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.									.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.									.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	A	A	I	V	E	M	T	T	N	G	D	F	.	.	.	I	R	T	I	P	L	D	F	.	.	.	.	.	V	K	D	L	E	T	I	E	Y	I	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.									.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.									.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	Y	Q	P	V	I	D	D	C	R	R	L	W	V	V	D	I	G	S	V	E	Y	R	S	R	G	A	K	D	Y	P	S	H	R	P	A	I	V	A	Y	D	L	K	Q	P	N	Y	P	E	V	V	R	Y	Y	F	P	T	R	L	V	E	K	P	T	Y	F	G	G	F	A	V	D	V	A	N	P	K	G	D
Template Known Secondary structure										T	T									S	S		S	S		S	T	T	G	G	G	S												S	S	S	T	T											G	G	G				G	G	G									S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.																																									.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence		.																																									.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		.	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	.	.	.	.	.	.	.	.	.	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	.	.	.	.	H	T	F	W	F	F	K	E	K	N	P	I
Query Conservation		.																																									.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence		.																																									.	.	.	.	.	.	.	.	.															.	.	.	.								.
Template Conservation																																																																													.
Template Sequence		C	S	E	T	F	V	Y	I	T	N	F	L	R	G	A	L	F	I	Y	D	H	K	K	Q	D	S	W	N	V	T	H	P	T	F	K	A	E	R	P	T	K	F	D	Y	G	G	K	E	Y	E	F	K	A	G	I	F	G	I	T	L	G	D	R	D	S	E	G	N	R	P	A	Y	Y	L	A	.	G	S	A	I
Template Known Secondary structure		S		S								T	T	T	T							T	T	T	T								G	G	G	S			S							T	T																			T	T	S									.	S	S		S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K
Query Conservation
Alig confidence																																																																				.	.
Template Conservation																																																																				.	.
Template Sequence		K	V	Y	S	V	N	T	K	E	L	K	Q	K	G	G	K	L	N	P	E	L	L	G	N	R	G	K	Y	N	D	A	I	A	L	A	Y	D	P	K	T	K	V	I	F	F	A	E	A	N	T	K	Q	V	S	C	W	N	T	Q	K	M	P	L	R	M	K	.	.	N	T	D	V	V	Y	T	S	S	R	F	V
Template Known Secondary structure												S	S	T	T													T	T										T	T	T								S	S	S	S							T	T	S		S	B		G	G	.	.	G								T	T
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		F	G	T	D	I	S	V	D	S	K	G	G	L	W	F	M	S	.	.	N	G	F	P	P	I
Template Known Secondary structure		S								T	T	S							.	.		S			S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions