Job Description P39382 Confidence 98.64% Date Thu Jan 5 12:00:14 GMT 2012 Rank 109 Aligned Residues 210 % Identity 10% Template c3pe7A_ PDB info PDB header:lyase Chain: A: PDB Molecule:oligogalacturonate lyase; PDBTitle: oligogalacturonate lyase in complex with manganese Resolution 1.65 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		T	W	S	A	Q	S	N	T	L	F	S	T	I	.	.	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		C	F	T	R	D	G	S	K	L	L	F	G	G	A	F	D	G	P	W	N	Y	Y	L	L	D	L	N	T	Q	V	A	T	Q	L	T	E	G	R	G	D	N	T	F	G	G	F	L	S	P	D	D	D	A	L	F	Y	V	K	D	G	R	N	L	M	R	V	D	L	A	T	L	E	E	N	V	V	Y	Q	V	P
Template Known Secondary structure			B		T	T	S									T	T	S	S								T	T	T									S	S		B		S	S	S					T	T	S	S							T	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		142	.	.	.																																																									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	W	V	G	Y	G	T	W	V	A	N	S	D	C	T	K	L	V	G	I	E	I	R	R	E	D	W	V	P	L	T	D	W	K	K	F	H	E	F	Y	F	T	K	P	C	C	R	L	M	R	V	D	L	K	T	G	E	S	T	V	I	L	Q	E	N	Q	W	L	G	H	P	I	Y	R	P	Y	D	D	S
Template Known Secondary structure		T	T											T	T	S	S									G	G	G						S								G	G	G											T	T	T										S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	.	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M
Query Conservation																																																															.	.	.	.
Alig confidence																																								.	.																						.	.	.	.
Template Conservation																																								.	.
Template Sequence		T	V	A	F	C	H	E	G	P	H	D	L	V	D	A	R	M	W	L	I	N	E	D	G	T	N	M	R	K	V	K	T	H	A	E	G	E	S	.	.	C	T	H	E	F	W	V	P	D	G	S	A	L	V	Y	V	S	Y	L	K	G	S	P	D	R	F	I	Y	S	A	D	P	E	T	L	E	N	R	Q	L
Template Known Secondary structure									S		T	T	T	S	S		S						T	T	S						S					T	T			.	.								T	T	S	S									T	T											T	T	T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	.	.	.	.	.	F	Y	R	F	T	P	Q	S	S
Query Conservation																																					.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	M	P	A	.	.	.	.	.	.	.	.	.	.	C	S	H	L	M	S	N	Y	D	G	S	L	M	V	G	D	G	S	D	A	E	N	D	P	F	L	Y	V	F	N	M	K	N	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.								T	T	S	S																				T	T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.											.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions