Job Description P39382 Confidence 98.06% Date Thu Jan 5 12:00:14 GMT 2012 Rank 133 Aligned Residues 223 % Identity 15% Template c3ow8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	.	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I
Query Conservation																																																							.
Alig confidence																						.	.	.																															.
Template Conservation																						.	.	.
Template Sequence		Y	G	I	L	F	K	Q	E	Q	A	H	D	D	A	I	W	S	V	A	W	.	.	.	G	E	T	V	V	T	G	S	L	D	D	L	V	K	V	W	K	W	R	D	E	R	L	D	L	Q	W	S	L	E	G	H	Q	L	G	V	V	S	V	D	I	S	H	T	L	P	I	A	A	S	S	S	L	D	A	H	I
Template Known Secondary structure									T	T	S	S	S	S								.	.	.									T	T	S									T	T												S	S									S	S	S	S							T	T	S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		R	L	W	D	L	E	N	G	K	Q	I	K	S	I	D	A	G	P	V	D	A	W	T	L	A	F	S	P	D	S	Q	Y	L	A	T	G	T	H	V	G	K	V	N	I	F	G	V	E	S	G	K	K	E	Y	S	L	D	T	R	G	K	F	I	L	S	I	A	Y	S	P	D	G	K	Y	L	A	S	G	A	I
Template Known Secondary structure						T	T	T	T										T	T									T	T	S	S							T	T	S							T	T	T		S								S	S	S									T	T	S	S							T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																																																																	203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																													.
Template Sequence		D	G	I	I	N	I	F	D	I	A	T	G	K	L	L	H	T	L	E	G	H	A	M	P	I	R	S	L	T	F	S	P	D	S	Q	L	L	V	T	A	S	D	D	G	Y	I	K	I	Y	D	V	Q	H	A	N	L	A	G	T	L	S	G	H	A	S	W	V	L	N	V	A	F	C	P	D	.	D	T	H	F
Template Known Secondary structure		T	S							T	T	T	T										S	S									T	T	S								T	T	S							T	T	T											S	S									T	T	.	S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																	.																																		.
Query SS confidence																	.																																		.
Query Sequence		V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	.	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T
Query Conservation																	.																																		.
Alig confidence																	.														.	.	.	.	.	.	.	.	.												.
Template Conservation																															.	.	.	.	.	.	.	.	.
Template Sequence		V	S	S	S	S	D	K	S	V	K	V	W	D	V	G	T	R	T	C	V	H	T	F	F	D	H	Q	D	Q	.	.	.	.	.	.	.	.	.	V	W	G	V	K	Y	N	G	N	G	S	K	I	V	S	V	G	D	D	Q	E	I	H	I	Y	D
Template Known Secondary structure						T	T	S							T	T	T	T										S	S		.	.	.	.	.	.	.	.	.								T	T	S	S							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions