Job Description P39382 Confidence 99.81% Date Thu Jan 5 12:00:14 GMT 2012 Rank 10 Aligned Residues 232 % Identity 9% Template c3kyaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase; PDBTitle: crystal structure of putative phosphatase (np_812416.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.77 a resolution Resolution 1.77 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																			.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	.	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	C	G	F	S	D	N	G	R	L	A	F	D	P	L	N	K	D	H	L	Y	I	C	Y	D	G	H	K	A	I	Q	L	I	D	L	K	N	R	X	L	S	S	P	L	N	I	N	T	I	P	T	N	R	I	R	S	I	A	F	N	K	K	I	E	G	Y	A	D	E	A	E	Y	X	I	V	A	I	D	Y	D
Template Known Secondary structure			B				S								T	T											T									T	T	T	T									T	T	S	S		S	B										B	T	T	T	B		T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
																																		101	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																			.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																			.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	E	T	I	E	Y	I	G	.	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																			.	.	.
Template Conservation
Template Sequence		G	K	G	D	E	S	P	S	V	Y	I	I	K	R	N	A	D	G	T	F	D	D	R	S	D	I	Q	L	I	A	A	Y	K	Q	C	N	G	A	T	I	H	P	I	N	G	E	L	Y	F	N	S	Y	E	K	G	Q	V	F	R	L	D	L	V	D	Y	F	K	T	I	K	N	G	G	S	W	D	P	I	V	K
Template Known Secondary structure		T	T	G	G	G											T	T	S			S	T	T	S									S									T	T	T								T	T	T	T																T	T						B	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
										145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																					.																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																					.																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	.	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	.	.	.	.	.	.	.	.	.	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V
Query Conservation		.	.	.	.	.	.	.	.																					.																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																					.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	P	N	T	F	K	Q	L	F	T	I	A	D	P	S	W	E	F	Q	I	F	I	H	P	T	G	K	Y	A	Y	F	G	V	I	N	N	H	Y	F	X	R	S	D	Y	D	E	I	K	K	E	F	I	T	P	Y	N	F	V	G	G	Y	K	Q	S	G	Y	R	D	D	V	G	T	E	A	R	X	N	N	P
Template Known Secondary structure		G		T	T	T								S	S	S	S									T	T	S	S							T	T	T	T									T	T	T	T											B	T	T	B				B			B	G	G	G		B		S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		207	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.															.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		S	G	A	E	F	N	.	.	.	.	.	.	.	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	.
Query Conservation								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence								.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		C	Q	G	V	F	V	K	N	P	D	Y	T	G	E	E	E	Y	D	F	Y	F	V	D	R	L	N	F	C	V	R	K	V	T	P	E	G	I	V	S	T	Y	A	G	R	G	A	S	T	S	L	A	D	G	N	Q	W	G	T	D	D	G	D	L	R	E	V	A	R	F	R	D	V	S	G	L	V	Y	D	D	V
Template Known Secondary structure										T	T			S	S										G	G	G	T							T	T		B							S		T	T						S		S								T	T	T	T				S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		265	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		S	G	N	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S	S
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		K	E	X	F	Y	V	H	D	Q	V	G	H	T	I	R	T	I	S	X	E	Q	E
Template Known Secondary structure		T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions