Job Description P39382 Confidence 91.81% Date Thu Jan 5 12:00:14 GMT 2012 Rank 177 Aligned Residues 214 % Identity 15% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																						.	.	.	.
Query SS confidence																													.	.	.	.	.																																						.	.	.	.
Query Sequence		A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	.	.	.	.	.	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	.	.	.	.	D	E	R	D	Y	A	I
Query Conservation																													.	.	.	.	.																																						.	.	.	.
Alig confidence																													.	.	.	.	.																		.	.																			.	.	.	.
Template Conservation																																																			.	.
Template Sequence		P	D	G	T	T	A	L	D	Q	L	S	F	S	R	D	G	R	I	L	A	Y	S	L	S	L	A	G	S	D	W	R	E	I	H	L	X	D	V	E	S	K	Q	P	L	E	T	P	L	K	.	.	D	V	K	F	S	G	I	S	W	L	G	N	E	G	F	F	Y	S	S	Y	D	K	P	T	D	Q	H	K	V
Template Known Secondary structure		T	T	S											T	T	S	S									T	T		S									T	T	T	T									.	.				S							T	T	T							S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		Y	F	H	R	L	G	T	A	Q	E	D	D	R	L	V	F	G	A	I	P	A	.	.	.	.	Q	H	H	R	Y	V	G	A	T	V	T	E	D	D	R	F	L	L	I	S	A	A	N	S	T	S	G	N	R	L	Y	V	K	D	L	S	Q	E	N	A	P	L	L	T	V	Q	G	D	L	D	A	D	V	S	L
Template Known Secondary structure						T	T	S		G	G	G						S		S	G	G	.	.	.	.	G			S								T	T	S									S	S	S	S									T	T	S	T	T									S	S	S	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																								.	.	.																																																	.	.
Query SS confidence																								.	.	.																																																	.	.
Query Sequence		D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	.	.	.	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	.	.	N	R	F	Y	R
Query Conservation																								.	.	.																																																	.	.
Alig confidence						.	.	.	.	.	.													.	.	.												.	.	.	.	.	.																																.	.
Template Conservation						.	.	.	.	.	.																											.	.	.	.	.	.
Template Sequence		V	D	N	K	.	.	.	.	.	.	G	S	T	L	Y	L	L	T	N	R	D	A	P	N	R	R	L	V	T	V	D	A	A	N	P	G	.	.	.	.	.	.	P	A	H	W	R	D	L	I	P	E	R	Q	Q	V	L	T	V	H	S	G	S	G	Y	L	F	A	E	Y	X	V	D	A	T	A	R	V	E	Q
Template Known Secondary structure						.	.	.	.	.	.	T	T								T	T		T	T								T	T	S			.	.	.	.	.	.	G	G	G									S	S								T	T									T	T
Template Predicted Secondary structure						.	.	.	.	.	.																											.	.	.	.	.	.
Template SS confidence
		284	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.							.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	P	Q	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	Y	E	G	K
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions