Job Description P39382 Confidence 98.65% Date Thu Jan 5 12:00:14 GMT 2012 Rank 106 Aligned Residues 214 % Identity 10% Template c3i2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 92; PDBTitle: crystal structure of wd40 repeats protein wdr92 Resolution 1.95 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																													.	.	.
Query SS confidence																												.	.																													.	.	.
Query Sequence		G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	.	.	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	.	.	.	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L
Query Conservation																												.	.																													.	.	.
Alig confidence																												.	.																													.	.	.
Template Conservation
Template Sequence		G	F	N	Y	T	V	F	D	C	K	W	V	P	C	S	A	K	F	V	T	M	G	N	R	G	T	G	V	I	Q	L	Y	E	I	Q	H	G	D	L	K	L	L	R	E	I	E	K	A	K	P	I	K	C	G	T	F	G	A	T	S	L	Q	Q	R	Y	L	A	T	G	D	F	G	G	N	L	H	I	W	N	L
Template Known Secondary structure				S	S									T	T	S	S																				S	S	S										S	S								T	T			T	T	T								T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A
Query Conservation
Alig confidence																							.	.																																.	.
Template Conservation																							.	.																																.	.
Template Sequence		E	A	P	E	M	P	V	Y	S	V	K	G	H	K	E	I	I	N	A	I	D	.	.	G	I	G	G	L	G	I	G	E	G	A	P	E	I	V	T	G	S	R	D	G	T	V	K	V	W	D	P	R	Q	K	.	.	D	D	P	V	A	N	M	E	P	V	Q	G	E	N	K	R	D	C	W	T	V	A	F	G
Template Known Secondary structure		T	S		S	S		S							S	S							.	.			S	G	G	G			.										T	T	S							T	T	S		.	.	S	S		S							T	T	S
Template Predicted Secondary structure																							.	.																																.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	.	.	.	.	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T
Query Conservation																																																											.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.
Template Sequence		N	A	Y	N	Q	E	E	R	V	V	C	A	G	Y	D	N	G	D	I	K	L	F	D	L	R	N	M	A	L	R	W	E	T	N	I	K	N	G	.	.	.	.	.	.	.	.	.	V	C	S	L	E	F	D	R	K	D	I	S	M	N	K	L	V	A	T	S	L	E	G	K	F	H	V	F	D
Template Known Secondary structure						.										T	T	S							T	T	T	T									S	S		.	.	.	.	.	.	.	.	.							S		S	S	S	S									S	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions