Job Description P39382 Confidence 97.86% Date Thu Jan 5 12:00:14 GMT 2012 Rank 145 Aligned Residues 219 % Identity 9% Template c3fm0A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1 Resolution 1.70 Å

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		52	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																						.	.
Query SS confidence									.																																						.	.
Query Sequence		E	I	A	G	I	T	N	.	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	.	.	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S
Query Conservation									.																																						.	.
Alig confidence									.																																						.	.
Template Conservation
Template Sequence		R	V	P	A	H	P	D	S	R	C	W	F	L	A	W	N	P	A	G	T	L	L	A	S	C	G	G	D	R	R	I	R	I	W	G	T	E	G	D	S	W	I	C	K	S	V	L	S	E	G	H	Q	R	T	V	R	K	V	A	W	S	P	C	G	N	Y	L	A	S	A	S	F	D	A	T	T	C	I	W	K
Template Known Secondary structure						S	T	T	S									T	T	S	S							T	T	S									T	T										S	S		S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Template Sequence		K	N	Q	D	F	E	C	V	T	.	.	.	.	.	.	.	.	T	L	E	G	H	E	N	E	V	K	S	V	A	W	A	P	S	G	N	L	L	A	T	C	S	R	D	K	S	V	W	V	W	E	V	D	E	E	D	E	Y	E	C	V	S	V	L	N	S	H	.	.	.	.	.	.	.	T	Q	D	V	K	H
Template Known Secondary structure											.	.	.	.	.	.	.	.						S	S									T	T	S	S							T	T	S									T	T	S												.	.	.	.	.	.	.		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	W	H	P	S	Q	E	L	L	A	S	A	S	Y	D	D	T	V	K	L	Y	R	E	E	E	D	D	W	V	C	C	A	T	L	E	G	H	E	S	T	V	W	S	L	A	F	D	P	S	G	Q	R	L	A	S	C	S	D	D	R	T	V	R	I	W	R	Q	Y	L	P	G	N	E	Q	G	V	A	C	S
Template Known Secondary structure						S	S	S	S							T	T	S									T	T												S	S									T	T	S	S							T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
																				259	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	A	M	D	A	S	G	N	.	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		P	S	W	K	C	I	C	T	L	S	G	F	H	S	R	T	I	Y	D	I	A	W	C	Q	L	T	G	A	L	A	T	A	C	G	D	D	A	I	R	V	F	Q	E	D	P	N
Template Known Secondary structure												S	S		S	S									T	T	T								T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions