|   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | I | A | G | I | T | N | N | I | S | S | L | T | W | S | A | . |
Q | S | N | T | L | F | S | T | I | N | K | P | A | A | I | V | E | M | T | T | N | G | D | . |
F | I | R | T | I | P | L | D | F | V | K | D | L | E | T | I | E | Y | I | G | . |
D | N | Q | F | V | I | S | D | E | R | D | Y | A | I | Y | V | I |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|
Template Sequence |   |
R | T | A | S | P | F | D | R | R | V | T | S | L | E | W | H | P | T | H | P | T | T | V | A | V | G | S | K | G | G | D | I | I | L | W | D | Y | D | V | Q | N | K | T | S | F | I | Q | G | M | G | P | G | D | A | I | T | G | M | K | F | N | Q | F | N | T | N | Q | L | F | V | S | S | I | R | G | A | T | T | L | R |
Template Known Secondary structure |   |
 |  |  |
|
|
| S | S |
|  |  |  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |  | B | T | S |
|  |  |  |  |  | T | T | S | T | T |
|  |  |  |  |
|
|
| S | T | T |
| B |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | L | T | P | N | S | E | V | K | I | L | K | K | I | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | F | S | G | S | V | I | Q | V | F | A | K | T | D | S | W | D | Y | W | Y | C | C | V | D | V | S | V | S | R | Q | M | L | A | T | G | D | S | T | G | R | L | L | L | L | G | L | D | G | H | E | I | F | K | E | K | L | H | K | A | K | V | T | H | A | E | F | N | P | R | C | D | W | L | M | A | T | S | S | V | D |
Template Known Secondary structure |   |
 | T | T | S |
|  |  |  |  |  |  |
|
|
|
| S | S |
|
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |
| S | S |
| T | T |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | P | L | Q | D | S | P | T | N | C | G | F | E | G | L | A | Y | S | R | . |
Q | D | H | T | F | W | F | F | K | E | K | N | P | I | E | V | Y | K | V | N | G | L | L | S | S | N | E | L | H | I | S | K | D | E | A | L | Q | R | Q | F | T | L | D | D | V |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |
Template Sequence |   |
A | T | V | K | L | W | D | L | R | N | I | K | D | K | N | S | Y | I | A | E | M | P | H | E | K | P | V | N | A | A | Y | F | N | P | T | D | S | T | K | L | L | T | T | D | Q | R | N | E | I | R | V | Y | S | S | Y | D | W | S | K | P | D | Q | I | I | I | H | P | H | R | Q | F | Q | H | L | T | P | I | K | . |
. |
Template Known Secondary structure |   |
S |  |  |  |  |  |  | G | G | G |
|
| S | T | T |
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |
| T | T | T | S |
|  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | T | T | B | T | T | S |
| S |  |  |  |  |
|
| B |
|
|
| T | T | S |
|
|
|
| . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
|
  |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | |
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | A | E | F | N | Q | Q | K | N | T | L | L | V | L | S | . |
. |
. |
. |
. |
. |
. |
. |
H | E | S | R | A | L | Q | E | V | T | L | V | . |
G | E | V | I | G | E | M | S | L | T | K | G | S | R | G | L | S | H | N | I | K | Q | A | E | G | V | A | M | D | A | S | G | N | I | Y | I | V | S | E | P | N | R | F |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|
|   |
|
|
|   |
|   |   |
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . | . | . | . | . | . |   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |
|
Template Sequence |   |
. |
. |
A | T | W | H | P | M | Y | D | L | I | V | A | G | R | Y | P | D | D | Q | L | L | L | N | D | K | R | T | I | D | I | Y | D | A | N | S | G | G | L | V | H | Q | L | R | D | P | N | A | A | G | I | I | S | L | . |
. |
. |
. |
. |
. |
. |
N | K | F | S | P | T | G | D | V | L | A | S | G | M | G | F | N | I |
Template Known Secondary structure |   |
. | . |
|  |  |
| S | S | S | S |  |  |  |  |  |
| B |
|
| T | T | T |
| T | T |
|
|
|
|  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
| B | T | T | B |
| S |
|
|
|  | . | . | . | . | . | . | . |  |  |  |
| T | T | S | S |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
  |
  |   |
278 | . | 280 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Y | R | F | T | P | Q |
Query Conservation |   |
  |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
Template Sequence |   |
L | I | W | N | R | E |
Template Known Secondary structure |   |
 |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
450 | . | . | . | . | . |
  |