Job Description P39382 Confidence 98.83% Date Thu Jan 5 12:00:14 GMT 2012 Rank 96 Aligned Residues 232 % Identity 8% Template c3dwlH_ PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	.	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		S	Q	V	L	H	I	L	P	K	P	S	Y	E	H	A	F	N	S	Q	R	T	E	F	V	T	T	T	A	T	N	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	V	T	C	S	Q	D	R	N	A	Y	V	Y	T
Template Known Secondary structure									S	S			S						S	S	S	S							S	S	S		B							T	T								B				S	S									T	T	T								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		129	130	.	.																															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	K	Q	T	L	V	L	L	R	L	N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	S	G	A	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	R	P	L	R	S	T	I	L	S	L	D	W	H	P	N	N	V	L	L	A	A	G	C	A	D	R	K	A	Y	V	L
Template Known Secondary structure												S	S									T	T	S	S							S	S	S							B			B							S	S			S									T	T	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	.	.	.	.	.	.	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																			.																																		.	.	.	.
Template Conservation																																												.																																		.	.	.	.
Template Sequence		S	A	Y	V	R	D	V	D	K	P	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	S	.	G	N	A	L	A	Y	A	G	H	D	S	S	V	T	I	A	Y	P	S	A	P	E	Q	P	P	R	A	L	I	T	V	K	L	.	.	.	.
Template Known Secondary structure						T	T						S		S	S		S														S	S	S								T	T	.	S	S							T	T	T									S	T	T	S											.	.	.	.
Template Predicted Secondary structure																																												.																																		.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L	P	L	R	S	L	L	W	A	N	E	S	A	I	V	A	A	G	Y	N	Y	S	P	I	L	L	Q	G	N	E	A	H
Template Known Secondary structure		S	S	S										T	T							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions