Job Description P39382 Confidence 99.60% Date Thu Jan 5 12:00:14 GMT 2012 Rank 39 Aligned Residues 209 % Identity 13% Template c3dsmA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d. Resolution 1.90 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I
Query Conservation
Alig confidence																																				.																																													.
Template Conservation																																				.																																													.
Template Sequence		A	Q	S	X	V	I	R	D	G	I	G	W	I	V	V	N	N	S	H	V	I	F	A	I	D	I	N	T	F	K	E	V	G	R	.	I	T	G	F	T	S	P	R	Y	I	H	F	L	S	D	E	K	A	Y	V	T	Q	I	W	D	Y	R	I	F	I	I	N	P	K	T	Y	E	I	T	G	Y	I	E	C	.
Template Known Secondary structure									T	T							G	G	G	T							T	T	T							.					S	S									T	T							B	S		S							T	T	T	T									.
Template Predicted Secondary structure																																				.																																													.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	D	X	D	X	E	S	G	S	T	E	Q	X	V	Q	Y	G	K	Y	V	Y	V	N	C	W	S	Y	Q	N	R	I	L	K	I	D	T	E	T	D	K	V	V	D	E	L	T	I	G	I	Q	P	T	S	L	V	X	D	K	Y	N	K	X	W	T	I	T	D	G	G	Y	E	G	S	P	Y	G
Template Known Secondary structure		.	.	.	.	T	T			T	T	T		B								T	T								T	T									T	T	T	T									S	S		B							T	T	S						B			B		T	T		S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
																										203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		Y	E	A	P	S	L	Y	R	I	D	A	E	T	F	T	V	E	K	Q	F	K	F	K	L	G	D	W	P	S	E	V	Q	L	N	G	T	R	D	T	L	Y	W	I	N	N	D	I	W	R	X	P	V	E	A	D	R	.	.	.	.	.	.	.	.	.	V	P	V	R	P	F	L	E	F	R	D	T	K	Y	Y
Template Known Secondary structure		B										T	T	T	T										T	T										T	T	S							S	S	S						T	T		S	S	.	.	.	.	.	.	.	.	.			S	S		S	B				S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		259	260	.	.	.	.	.	.	.		.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure											.						.	.	.	.	.
Query SS confidence											.						.	.	.	.	.
Query Sequence		G	V	A	M	D	A	S	G	N	.	I	Y	I	V	S	.	.	.	.	.	E	P	N	R	F	Y	R	F	T	P	Q	S	S
Query Conservation											.						.	.	.	.	.
Alig confidence											.						.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	V	N	P	N	N	G	E	V	Y	V	A	D	A	I	D	Y	Q	Q	Q	G	I	V	Y	R	Y	S	P	Q	G	K
Template Known Secondary structure							T	T	T									T	T	S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions