Job Description P39382 Confidence 99.38% Date Thu Jan 5 12:00:14 GMT 2012 Rank 64 Aligned Residues 229 % Identity 14% Template c3dasA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the pqq-bound form of aldose sugar2 dehydrogenase (adh) from streptomyces coelicolor Resolution 1.60 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	T	V	A	T	G	L	N	S	P	W	G	L	A	P	L	P	G	G	D	L	L	V	S	S	R	D	E	A	T	I	T	R	V	D	A	K	T	G	R	K	T	E	L	G	E	V	P	G	V	S	P	S	G	E	G	G	L	L	G	I	A	L	S	P	D	Y	A	S	D	H	X	V	Y	A	Y	F	T	S
Template Known Secondary structure										S	S								T	T	S							T	T	T								T	T	T										T	T				B	T	T	B	S								T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
																													92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	D	N	R	I	V	R	X	L	Y	D	E	K	K	P	S	G	E	Q	L	G	A	P	D	T	V	F	R	G	I	P	K	G	V	I	H	N	G	G	R	I	A	F	G	P	D	K	X	L	Y	A	G	T	G	E	S	G	D	T	G	L	S	Q	D	R	K	S	L	G	G	K	I	L	R	X	T	P	D	G
Template Known Secondary structure		S	S	S								B		T	T	S		T	T			B														S	S										T	T	S							B		T	T		G	G	G	T	T		T	T		S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
							139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	.	.	.	.	.	.	.	.	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D
Query Conservation		.	.	.	.	.																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	A	P	G	N	P	F	P	G	S	P	V	Y	S	Y	G	H	R	N	V	Q	G	L	A	W	D	D	K	Q	R	L	F	A	S	E	F	G	Q	D	T	W	D	E	L	N	A	I	K	P	G	D	N	Y	G	W	P	E	A	E	G	K	G	G	G	S	G	F	H	D	P	V	A	Q	W	S	T	D	E	A
Template Known Secondary structure		S	B		T	T		S	S	T	T						B			S	B								T	T										S	S	S									T	T		B			T	T	T			S	S				T	T					S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.												.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	.	.	.	.	.	.	.	.	.	.	.	E	P
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																						.	.	.	.
Template Sequence		S	P	S	G	I	A	Y	A	E	.	G	S	V	W	X	A	G	L	R	G	E	R	L	W	R	I	P	L	K	G	T	.	.	.	.	A	A	A	A	D	P	Q	A	F	L	E	G	E	Y	G	R	L	R	T	V	A	P	A	G	G	D	K	L	W	L	V	T	S	N	T	D	G	R	G	D	A	K	G	G	D
Template Known Secondary structure										T	.	T							S	T	T		S								T	T	.	.	.	.			S	S						S	T	T	T	S	S										T	T								T	T	S	S	S	S				T	T
Template Predicted Secondary structure											.																						.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	F	Y	R	F	T	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	I	L	E	L	E	V	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions