Job Description P39382 Confidence 97.89% Date Thu Jan 5 12:00:14 GMT 2012 Rank 142 Aligned Residues 215 % Identity 11% Template c3cfvA_ PDB info PDB header:histone/chaperone Chain: A: PDB Molecule:histone-binding protein rbbp7; PDBTitle: structural basis of the interaction of rbap46/rbap48 with2 histone h4 Resolution 2.60 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	.	.	.	.	.	.	.	.	.	.	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	.	F	V	I	S	D	E	R	D	Y	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		N	H	E	G	E	V	N	R	A	R	Y	X	P	Q	N	P	H	I	I	A	T	K	T	P	S	S	D	V	L	V	F	D	Y	T	K	H	P	A	K	P	D	P	S	G	E	C	N	P	D	L	R	L	R	G	H	Q	K	E	G	Y	G	L	S	W	N	S	N	L	S	G	H	L	L	S	A	S	D	D	H	T
Template Known Secondary structure				S	S			S						T	T										S	S	S	S						G	G	G	S		S	S			T	T						S							S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																								.																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																																	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	.	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	.	.	.	.	.	.	.	.	.
Query Conservation																																								.																																	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																				.																																	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		V	C	L	W	D	I	N	A	G	P	K	E	G	K	I	V	D	.	.	A	K	A	I	F	T	G	H	S	A	V	V	E	D	V	A	W	H	L	L	H	E	S	L	F	G	S	V	A	D	D	Q	K	L	X	I	W	D	T	R	S	N	T	T	S	K	P	S	H	L	V	D	A	H	T	A	E	V	N	C	L
Template Known Secondary structure							S	S		S		S	S		S				.	.		S							S	S									S	S		T	T							T	T	S							S	S	S	S		S	S	S		S							S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
																														194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	N	P	Y	S	E	F	I	L	A	T	G	S	A	D	K	T	V	A	L	W	D	L	R	N	L	K	L	K	L	H	T	F	E	S	H	K	D	E	I	F	Q	V	H	W	S	P	H	N	E	T	I	L	A	S	S	G	T	D	R	R	L	N	V	W	D	L	S	K	I	G	E	E	Q	S	A	E	D	A
Template Known Secondary structure					S	S		S	S							T	T	S							T	T		T	T	S									S	S									S	S		T	T							T	T	S							G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
						235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure		.	.	.	.																															.
Query SS confidence		.	.	.	.																															.
Query Sequence		.	.	.	.	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	.	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F
Query Conservation		.	.	.	.																															.
Alig confidence		.	.	.	.								.	.	.	.	.	.	.	.	.															.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		E	D	G	P	P	E	L	L	F	I	H	.	.	.	.	.	.	.	.	.	G	G	H	T	A	K	I	S	D	F	S	W	N	P	N	E	P	W	V	I	C	S	V	S	E	D	N	I	X	Q	I
Template Known Secondary structure		T	T			T	T						.	.	.	.	.	.	.	.	.				S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.										370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions