Job Description P39382 Confidence 99.21% Date Thu Jan 5 12:00:14 GMT 2012 Rank 72 Aligned Residues 211 % Identity 12% Template c3c75J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: paracoccus versutus methylamine dehydrogenase in complex2 with amicyanin Resolution 2.50 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.											.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																			.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																			.	.
Query Sequence		S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	.	.	.	.	.	.	.	.	.	.	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	.	.	.	.	.	.	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	.	.	E	R	D	Y	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																			.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		H	P	V	A	A	E	D	G	S	F	F	A	Q	A	S	T	V	F	E	R	I	A	R	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F	L	P	I	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	Q	W	M	N	A	L	T	P	D	N	K	N	L	L	F	Y	Q	F	S	P	A	P	A
Template Known Secondary structure							T	T	S	S												T	T													T	T	T										T	T							S			G	G	G	S				T	T	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		V	G	V	V	D	L	E	G	K	T	F	D	R	M	L	D	V	P	D	C	Y	H	I	F	P	A	S	.	.	P	T	V	F	Y	M	N	C	R	D	G	S	L	A	R	V	D	F	A	D	G	E	T	K	V	T	N	T	E	V	F	H	T	E	D	E	L	L	I	N	H	P	A	F	S	L	R	S	G	R	L
Template Known Secondary structure							T	T	T	T										S									.	.	T	T							T	T	S	S								T	T											S		T	T	S		B		S						T	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
																				183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	.	.	.	.	.	.	.	.	.	H	E	S	R	A	L	Q	E	V	T	L	V	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		V	W	P	T	Y	T	G	K	I	F	Q	A	D	L	T	A	E	G	A	T	F	R	A	P	I	E	A	L	T	E	A	E	R	A	D	D	W	R	P	G	G	W	Q	Q	T	A	Y	H	R	Q	S	D	R	I	Y	L	L	V	D	Q	R	D	E	W	K	H	K	A	A	S	R	F	V	V	V	L	N	A	E	T
Template Known Secondary structure					B	T	T	S									S	S										S	S		T	T	T	G	G	G	T					S	S	S						T	T	T	T											T	T		T	T	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																			.	.						.
Query SS confidence																																			.	.						.
Query Sequence		G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	.	.	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation																																			.	.						.
Alig confidence														.	.	.	.	.	.	.	.	.	.												.	.						.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	R	I	N	K	I	E	L	G	H	E	.	.	.	.	.	.	.	.	.	.	I	D	S	I	N	V	S	Q	D	A	E	P	L	L	Y	A	L	S	A	G	T	Q	T	L	H	I	Y	D	A	A	T
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.									S	S	S								T	T	T	T							T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.											.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions