Job Description P39382 Confidence 99.77% Date Thu Jan 5 12:00:14 GMT 2012 Rank 20 Aligned Residues 203 % Identity 10% Template c3bwsA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:protein lp49; PDBTitle: crystal structure of the leptospiral antigen lp49 Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																								.																																		.	.	.	.	.	.	.	.
Query SS confidence																																								.																																		.	.	.	.	.	.	.	.
Query Sequence		K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	.	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	.	.	.	.	.	.	.	.
Query Conservation																																								.																																		.	.	.	.	.	.	.	.
Alig confidence																																								.											.	.																						.	.	.	.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		A	T	V	D	L	T	G	K	W	S	K	I	L	L	Y	D	P	I	R	D	L	V	Y	C	S	N	W	I	S	E	D	I	S	V	I	D	R	K	T	K	L	E	I	R	K	T	D	K	I	.	.	G	L	P	R	G	L	L	L	S	K	D	G	K	E	L	Y	I	A	Q	F	S	A	S	N	Q	E	S	G	G
Template Known Secondary structure							S	S	S	S								T	T	T	T							T	T	T	T							T	T	T	T										.	.	S									T	T	S	S									S		T	T		S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Sequence		G	R	L	G	I	Y	S	X	D	K	E	K	L	I	D	T	I	G	P	.	.	.	.	.	.	.	.	.	P	G	N	K	R	H	I	V	S	G	N	T	E	N	K	I	Y	V	S	D	X	C	C	S	K	I	E	V	Y	D	L	K	E	K	K	V	Q	K	S	I	P	V	F	D	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T	T									.	.	.	.	.	.	.	.	.											S	S	T	T							T	T	T	T							T	T	T	T									S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.															.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																									.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	K	P	N	T	I	A	L	S	P	D	G	K	Y	L	Y	V	S	C	R	G	P	N	H	P	T	E	G	Y	L	K	K	G	L	V	L	G	K	V	Y	V	I	D	T	T	T	D	T	V	K	E	F	W	E	A	G	N	.	.	.	.	.	.	.	.	.	Q	P	T	G	L	D	V	S	P	D	N	R
Template Known Secondary structure		.	.	.	S								T	T	S	S												T	T	T		T	T	S			S	S									T	T	T	T									S	S	.	.	.	.	.	.	.	.	.	S								T	T	S
Template Predicted Secondary structure		.	.	.																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
					369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.										.	.	.	.	.	430	.	.	.	.	.	.
			268	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.						.
Query SS confidence		.						.
Query Sequence		.	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation		.						.
Alig confidence		.						.
Template Conservation
Template Sequence		Y	L	V	I	S	D	F	L	D	H	Q	I	R	V	Y	R	R	D	G
Template Known Secondary structure								T	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions