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Job DescriptionP39382
Confidence95.44%DateThu Jan 5 12:00:14 GMT 2012
Rank170Aligned Residues220
% Identity11%Templatec3azqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of puromycin hydrolase s511a mutant complexed with2 pgg
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70..... ....80.........90...... ...100.........110.........120.
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Query Sequence  NNISSLTWSAQSNTLFST. . . . . INKPAAIVEMTTNGDFIRTIP. . . . . . . . . . . LDFVKDLETIEYIGDNQFVISDERD
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Template Sequence  RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD
Template Known Secondary structure  T
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TTTTTTT
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TT

B


GGGT





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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   122.......130.........140.........150.........160......... 170.........180.........190.....
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Query Sequence  YAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFF. . . . . . KEKNPIEVYKVNGLLSSNELHISKDE
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Template Sequence  QRLYAFEPDAPGGAVPRPLTPVSAVGGGL. . RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV
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TTSTT




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   102.......110.........120.........130 .........140.........150.........160.........170.........
 
   196...200.........210.........220...... ...230.........240.........250.........260......
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Query Sequence  ALQRQFTLDDVSGAEFNQQKNTLLVLSHESR. . . . . . . . . ALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG
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Template Sequence  RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE. . . . . . AIAQAEWAPDG
Template Known Secondary structure  SS
S
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TTSS
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   180.........190.........200.........210.........220.........230.........240.. .......250...
 
   267..270..... ....280.....
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Query Sequence  NIYIVSEPN. . . RFYRFTPQSS
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Template Conservation           
   
        
Template Sequence  SLIVATDRTGWWNLHRVDPATG
Template Known Secondary structure 

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TTT
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   254.....260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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