Job Description P39382 Confidence 99.81% Date Thu Jan 5 12:00:14 GMT 2012 Rank 9 Aligned Residues 222 % Identity 11% Template c2z2pA_ PDB info PDB header:lyase/antibiotic Chain: A: PDB Molecule:virginiamycin b lyase; PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin Resolution 2.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	T	I	D	G	K	E	I	A	G	I	T	N	N	I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	F	V	I	S	D	E	R	D	Y	A	I
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		E	F	K	L	Q	E	L	N	L	T	N	Q	D	T	G	P	Y	G	I	T	V	S	D	K	G	.	K	V	W	I	T	Q	H	K	A	N	M	I	S	C	I	N	L	D	G	K	I	T	E	Y	E	L	P	N	K	G	A	K	V	M	C	L	T	I	S	S	D	G	E	V	W	F	T	E	N	A	A	N	K	I
Template Known Secondary structure											S			S										S	S	S	.							T	T	T	T							T	T	S								S	S	S											T	T	S							T	T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		G	R	I	T	K	K	G	I	I	K	E	Y	.	.	.	.	.	.	.	.	.	T	L	P	N	P	D	S	A	P	Y	G	I	T	E	G	P	N	G	D	I	W	F	T	E	M	N	G	N	R	I	G	R	I	T	D	D	G	K	I	R	E	Y	E	L	P	N	K	G	S	Y	P	S	F	I	T	L	G	S	D
Template Known Secondary structure						T	T	S						.	.	.	.	.	.	.	.	.			S	S	T	T										T	T	S							T	T	T	T							S	S			B						S	S	T	T										T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
																							194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																															.	.	.	.	.	.	.
Template Conservation																																												.																															.	.	.	.	.	.	.
Template Sequence		N	A	L	W	F	T	E	N	Q	N	N	A	I	G	R	I	T	E	S	G	D	I	T	E	F	K	I	P	T	P	A	S	G	P	V	G	I	T	K	G	N	D	.	D	A	L	W	F	V	E	I	I	G	N	K	I	G	R	I	T	T	S	G	E	I	T	E	F	K	I	P	T	P	.	.	.	.	.	.	.
Template Known Secondary structure		S	S						T	T	T	T							T	T									S	S	T	T										T	T	.	S	S						T	T	T	T							S	S									S	S	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																															.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S	S
Query Conservation																						.
Alig confidence		.																				.
Template Conservation		.
Template Sequence		.	N	A	R	P	H	A	I	T	A	G	A	G	I	D	L	W	F	T	E	W	G	A	N	K	I	G	R	L	T	S	N	N	I
Template Known Secondary structure		.	T										S	T	T							T	T	T	T							G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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