Job Description P39382 Confidence 99.19% Date Thu Jan 5 12:00:14 GMT 2012 Rank 76 Aligned Residues 209 % Identity 7% Template c2vduB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(7)-)-methyltransferase- PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex Resolution 2.40 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																			.
Query SS confidence																																						.	.	.	.																			.
Query Sequence		I	S	S	L	T	W	S	A	Q	S	N	T	L	F	S	T	I	N	K	P	A	A	I	V	E	M	T	T	N	G	D	F	I	R	T	I	.	.	.	.	P	L	D	F	V	K	D	L	E	T	I	E	Y	I	G	D	N	Q	.	F	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E
Query Conservation																																						.	.	.	.																			.
Alig confidence																																						.	.	.	.																			.
Template Conservation
Template Sequence		L	Q	N	L	L	T	S	R	D	G	S	L	V	F	A	I	I	K	N	C	I	L	S	F	K	Y	Q	S	P	N	H	W	E	F	A	G	K	W	S	D	D	F	P	I	Y	S	Y	I	R	N	L	R	L	T	S	D	E	S	R	L	I	A	C	A	D	S	D	K	S	L	L	V	F	D	V	D	K	T	S	K
Template Known Secondary structure									S	S	S	S							T	T									T	T	T																									T	T	S	S							G	G	G	T									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N	G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	V	S	G	A	E	F	N	Q	Q
Query Conservation
Alig confidence								.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		N	V	L	K	L	R	.	.	.	.	.	K	R	F	C	F	S	K	R	P	N	A	I	S	I	A	E	D	D	T	T	V	I	I	A	D	K	F	G	D	V	Y	S	I	D	I	.	.	.	.	.	.	N	S	I	P	E	E	K	F	T	Q	E	P	I	L	G	H	V	S	M	L	T	D	V	H	L	I	K	D
Template Known Secondary structure		S						.	.	.	.	.						S	S									T	T	S	S							T	T	S							T	.	.	.	.	.	.	T	S				S	S						S				S	S
Template Predicted Secondary structure								.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
				215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	N	T	L	L	V	L	S	H	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E	M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	E	P	N	R	F	Y	R	F	T	P	Q	S	S	H
Query Conservation		.	.
Alig confidence		.	.																																				.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		S	D	G	H	Q	F	I	I	T	S	D	R	D	E	H	I	K	I	S	H	Y	P	Q	C	F	I	V	D	K	W	L	F	G	H	K	H	F	.	.	.	.	.	.	.	V	S	S	I	C	C	G	K	D	Y	L	L	L	S	A	G	G	D	D	K	I	F	A	W	D	W	K	T	G	K
Template Known Secondary structure		T	T	S									T	T	S								S		T	T										S	S		.	.	.	.	.	.	.								S	T	T							S	S	S							T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.								.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions