Return to main results Retrieve Phyre Job Id

Job DescriptionP39382
Confidence99.83%DateThu Jan 5 12:00:14 GMT 2012
Rank8Aligned Residues231
% Identity9%Templatec2qc5A_
PDB info PDB header:lyaseChain: A: PDB Molecule:streptogramin b lactonase; PDBTitle: streptogramin b lyase structure
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  AASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVIS
Query Conservation 
              
       



   
   
         
      
               


        
 
Alig confidence 











..


















.













































Template Conservation          
 
 ..        
  

 
 

 .
 
       
   
  
             
  
     
     
Template Sequence  SEAWMNFYLEEF. . NLSIPDSGPYGITSSEDGK. VWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFT
Template Known Secondary structure 

GGGS..
SSTT


TTS
.TTTT
TTS

SSTT


TTS
Template Predicted Secondary structure 






..











.
















Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions