Job Description P39382 Confidence 99.75% Date Thu Jan 5 12:00:14 GMT 2012 Rank 23 Aligned Residues 178 % Identity 15% Template c2p9wA_ PDB info PDB header:allergen Chain: A: PDB Molecule:mal s 1 allergenic protein; PDBTitle: crystal structure of the major malassezia sympodialis allergen mala s2 1 Resolution 1.35 Å

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		103	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	E	T	I	E	Y	I	G	D	N	Q	F	.	V	I	S	D	E	R	D	Y	A	I	Y	V	I	S	L	T	P	N	S	E	V	K	I	L	K	K	I	K	I	P	L	Q	D	S	P	T	N	C	G	F	E	G	L	A	Y	S	R	Q	D	H	T	F	W	F	F	K	E	K	N	P	I	E	V	Y	K	V	N
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		P	E	D	T	I	Y	D	R	T	R	Q	V	F	Y	Q	S	N	L	Y	K	G	R	I	E	V	Y	N	P	K	T	Q	S	H	F	N	V	V	I	D	G	A	S	S	N	G	D	G	E	Q	Q	M	S	G	L	S	L	L	T	H	D	N	S	K	R	L	F	A	V	M	K	N	A	K	S	F	N	F	A	D	Q
Template Known Secondary structure			S						T	T	T	T							T	T	T	T							T	T	T									T	T	T			S	S			S									S	S	S	S	S											T	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		G	L	L	S	S	N	E	L	H	I	S	K	D	E	A	L	Q	R	Q	F	T	L	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	G	A	E	F	N	Q	Q	K	N	T	L	L	V	L	S	H	.	E	S	R	A	L	Q	E	V	T	L	V	G	E	V	I	G	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.
Template Conservation																																																									.
Template Sequence		S	S	H	G	A	S	S	F	H	S	F	N	L	P	L	S	E	N	S	K	P	V	W	S	V	N	F	E	K	V	Q	D	E	F	E	K	K	A	G	K	R	P	F	G	V	V	Q	S	A	Q	D	R	D	G	N	.	S	Y	V	A	F	A	L	G	M	P	A	I	A	R	V	S	A	D	G	K	T	V	S	T
Template Known Secondary structure			S	S	S									S	S			T	T				S					S												S	S												T	T	S		.								S	S								T	T	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		M	S	L	T	K	G	S	R	G	L	S	H	N	I	K	Q	A	E	G	V	A	M	D	A	S	G	N	I	Y	I	V	S	.	E	P	N	R	F	Y	R	F	T	P	Q	S
Query Conservation																																		.
Alig confidence											.	.	.																					.
Template Conservation											.	.	.
Template Sequence		F	A	W	E	S	G	N	G	G	.	.	.	Q	R	P	G	Y	S	G	I	T	F	D	P	H	S	N	K	L	I	A	F	G	G	P	R	A	L	T	A	F	D	V	S	K
Template Known Secondary structure									S	S	.	.	.	S			S		S						T	T	T	T						S	S	S	S	S							S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions